Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SZO_RS03150 Genome accession   NC_012470
Coordinates   666533..667342 (+) Length   269 a.a.
NCBI ID   WP_021320992.1    Uniprot ID   A0AAW3GKW3
Organism   Streptococcus equi subsp. zooepidemicus     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 661533..672342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SZO_RS03130 (SZO_05720) - 661942..663204 (+) 1263 WP_012677633.1 AMP-binding protein -
  SZO_RS03135 (SZO_05730) - 663249..664265 (+) 1017 WP_012677634.1 DUF3114 domain-containing protein -
  SZO_RS03140 (SZO_05740) vicR 664474..665184 (+) 711 WP_012677635.1 response regulator YycF Regulator
  SZO_RS03145 (SZO_05750) vicK 665177..666529 (+) 1353 WP_012677636.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SZO_RS03150 (SZO_05760) vicX 666533..667342 (+) 810 WP_021320992.1 MBL fold metallo-hydrolase Regulator
  SZO_RS03155 (SZO_05770) - 667533..669275 (+) 1743 WP_012677638.1 restriction endonuclease FokI C-terminal domain-containing protein -
  SZO_RS03160 (SZO_05780) - 669296..671227 (-) 1932 WP_041790359.1 Dam family site-specific DNA-(adenine-N6)-methyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30011.07 Da        Isoelectric Point: 5.5344

>NTDB_id=33466 SZO_RS03150 WP_021320992.1 666533..667342(+) (vicX) [Streptococcus equi subsp. zooepidemicus]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=33466 SZO_RS03150 WP_021320992.1 666533..667342(+) (vicX) [Streptococcus equi subsp. zooepidemicus]
ATGAGTGAGGTTGGCTTTAAATATAGTATTTTAGCATCAGGATCGACAGGGAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGGCCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTGTAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment