Detailed information NTG0033461

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: SZO_RS02470
• Genome accession: NC_012470
• Coordinates: 507118..509274 (-)
• Length: 718 a.a.
• NCBI ID: WP_012677515.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 502118..514274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SZO_RS02440 (SZO_04310)	-	502198..502455 (+)	258	WP_012516121.1	Blp family class II bacteriocin	-
SZO_RS02445 (SZO_04320)	-	502472..502675 (+)	204	WP_012516120.1	TmhB bacteriocin enhancer peptide	-
SZO_RS02450 (SZO_04330)	comE/blpR	503313..504062 (+)	750	WP_012516119.1	LytR/AlgR family response regulator transcription factor	Regulator
SZO_RS10935 (SZO_04340)	-	504062..505396 (+)	1335	WP_012677512.1	sensor histidine kinase	-
SZO_RS02460 (SZO_04351)	-	505518..505649 (-)	132	WP_012677513.1	ComC/BlpC family leader-containing pheromone/bacteriocin	-
SZO_RS02465 (SZO_04350)	-	505749..507107 (-)	1359	WP_012677514.1	bacteriocin secretion accessory protein	-
SZO_RS02470 (SZO_04360)	comA/nlmT	507118..509274 (-)	2157	WP_012677515.1	peptide cleavage/export ABC transporter	Regulator
SZO_RS02475 (SZO_04370)	-	509532..509780 (+)	249	WP_012677516.1	garvicin Q family class II bacteriocin	-
SZO_RS02480 (SZO_04380)	-	509787..510086 (+)	300	WP_041790663.1	bacteriocin immunity protein	-
SZO_RS02485 (SZO_04390)	-	510824..511078 (+)	255	WP_012516110.1	Blp family class II bacteriocin	-
SZO_RS02490 (SZO_04400)	-	511095..511298 (+)	204	WP_012516109.1	Blp family class II bacteriocin	-
SZO_RS02495 (SZO_04420)	-	511961..512365 (+)	405	WP_012677519.1	hypothetical protein	-
SZO_RS02500 (SZO_04430)	-	512616..513197 (+)	582	WP_012677520.1	GNAT family N-acetyltransferase	-
SZO_RS02505	-	513299..513502 (-)	204	WP_041790340.1	helix-turn-helix domain-containing protein	-
SZO_RS02510 (SZO_04441)	-	513934..514152 (+)	219	WP_021321053.1	hypothetical protein	-

Sequence

Protein

• Length: 718 a.a.
• Molecular weight: 80774.97 Da
• Isoelectric Point: 8.5335

>NTDB_id=33461 SZO_RS02470 WP_012677515.1 507118..509274(-) (comA/nlmT) [Streptococcus equi subsp. zooepidemicus]
MTLFYRRTFVPQIDARDCGVAALASIARYYGSDYSLAHLRELAKTNKEGTTALGIVMAAKEIGFETRPIQADMTLFDMAD
VPYPLIVHVNKEGKLQHYYVVYKSKKDYLIIGDPNPMVKVTKMSKERFASEWTGVTICLAPKPNYKPHKDQKNGLLGFFP
LIFKQRTLIFYIVLASVLVTVINIAGSYYLQGILDEYIPNQLKSTLGIVSIGLIITYILQQLMSFSRDYLLTVLSQRLTI
DVILSYIRHIFELPMSFFATRRTGEVTSRFTDANSIIDALASTILSFFLDLSILAIVGSVLLVQNSRLFLLSLISIPVYT
LIICAFIKPFEQMNHDVMQSNAMLSSAIIEDINGIETIKSLTSEENRYQKIDSDFVDYLDKSFRLSKYTILQATLKQGAQ
LILNIIILWFGAQLVINGRISIGQLITFNTLLAYFTTPLENIINLQTKLQAAKVANNRLNEVYLVESEFKASQALYDLSL
LQGDIQFEAVSYRYGFGKDTLSDITLTIKQGAKVTLVGVSGSGKTTLAKMLVNFFEPYKGRITINQNDLKTIDKKNLRQY
INYLPQQAYVFNGSILENLTLGAKQGISQEDILKACEIANIRHDIEQMPMGYQTELSDRAGLSGGQKQRIALARALLTQA
PILVLDEATSGLDILTEKKIIDRLMNMTDKTIIFVAHRLSIAERTDQVVVLNQGQIIETGSHQELMKQGGFYYHLFSE

Nucleotide

• Length: 2157 bp

>NTDB_id=33461 SZO_RS02470 WP_012677515.1 507118..509274(-) (comA/nlmT) [Streptococcus equi subsp. zooepidemicus]
ATGACACTTTTTTATAGAAGAACCTTTGTACCACAAATAGATGCCAGAGATTGTGGCGTAGCTGCTCTAGCCTCAATCGC
AAGGTATTATGGTTCAGATTATTCATTAGCTCATTTGAGAGAATTAGCAAAGACCAATAAGGAAGGGACAACAGCTCTTG
GTATTGTTATGGCTGCTAAGGAAATAGGGTTTGAAACCAGACCCATTCAAGCGGATATGACCCTCTTTGACATGGCAGAC
GTGCCCTATCCATTGATTGTCCATGTCAATAAAGAAGGAAAGCTACAGCACTACTATGTGGTCTACAAATCTAAAAAAGA
CTATCTTATCATTGGTGATCCCAATCCAATGGTCAAGGTCACAAAAATGTCCAAGGAACGCTTTGCTTCAGAATGGACAG
GTGTCACCATATGCCTTGCTCCTAAGCCAAATTATAAACCACATAAAGACCAAAAAAATGGACTATTAGGCTTCTTTCCG
CTTATTTTTAAACAGCGAACCCTTATATTTTATATCGTGTTAGCTTCTGTCTTGGTAACGGTCATTAATATTGCTGGTTC
ATACTATCTCCAGGGGATTTTAGACGAGTATATTCCAAATCAGCTGAAATCTACCTTAGGGATTGTATCAATTGGTCTCA
TCATTACCTATATACTCCAGCAGCTAATGAGCTTTTCTAGAGATTATCTTTTAACTGTCCTTAGCCAACGTCTTACGATT
GATGTGATCCTGTCCTATATCCGCCATATTTTCGAATTGCCGATGTCCTTTTTTGCAACACGTCGAACAGGTGAGGTAAC
CTCGCGCTTTACAGATGCTAACTCTATCATTGACGCACTCGCTTCAACCATTTTATCCTTCTTTCTAGACCTCTCTATAT
TAGCTATTGTCGGAAGTGTTCTTTTGGTGCAAAATAGCAGGCTTTTTCTGCTGTCCCTGATTTCTATTCCAGTATACACC
CTTATCATATGTGCCTTTATAAAGCCGTTTGAACAAATGAATCATGATGTGATGCAAAGCAATGCCATGCTAAGCTCTGC
TATTATCGAAGATATCAACGGGATCGAAACCATAAAATCACTAACCAGTGAAGAAAACCGTTACCAAAAAATTGACAGCG
ACTTTGTGGATTACCTCGATAAGTCCTTTAGGCTTAGTAAATATACCATCTTACAAGCCACACTTAAGCAAGGAGCGCAG
CTAATTCTGAATATCATCATTCTTTGGTTTGGGGCTCAACTGGTTATTAATGGTAGGATTTCAATTGGGCAGTTAATTAC
CTTTAACACACTTCTTGCCTATTTTACAACCCCTTTAGAAAATATCATTAATCTTCAAACCAAGCTCCAAGCAGCTAAGG
TTGCCAACAATCGTCTCAATGAGGTCTATCTTGTAGAGTCCGAATTTAAAGCCTCGCAAGCCTTATACGATTTATCGCTC
TTACAGGGTGACATTCAGTTTGAAGCTGTTTCCTATAGGTATGGCTTTGGCAAGGATACATTATCAGATATTACATTAAC
CATTAAGCAGGGAGCAAAAGTAACCCTTGTTGGTGTCAGCGGCTCAGGAAAAACAACCCTAGCCAAGATGCTCGTCAATT
TCTTTGAACCTTATAAGGGACGTATAACCATCAACCAAAACGATCTCAAGACCATTGATAAAAAGAATCTTCGACAATAC
ATCAACTACCTTCCACAACAAGCCTATGTGTTTAATGGATCTATCTTAGAAAATCTAACCTTGGGAGCCAAGCAGGGCAT
CAGCCAGGAAGACATTCTTAAAGCCTGTGAGATTGCTAACATTCGTCACGACATCGAGCAAATGCCAATGGGATACCAAA
CCGAGCTCTCTGATAGGGCTGGCTTATCTGGCGGACAAAAACAGAGAATTGCACTTGCTAGAGCATTACTAACCCAAGCT
CCTATACTAGTTCTTGATGAAGCAACCAGCGGACTTGACATACTGACAGAAAAGAAAATCATTGACCGTCTCATGAACAT
GACAGACAAAACGATTATTTTCGTTGCCCACCGGCTTAGTATCGCAGAGCGCACTGATCAGGTTGTTGTTCTTAATCAAG
GGCAAATCATTGAGACAGGCAGCCACCAGGAATTAATGAAACAAGGTGGATTTTATTACCACCTATTTAGTGAATAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-439)

• ABC transporter (ABC_tran) (501-650)

• Peptidase C39 family (Peptidase_C39) (8-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	70.572	99.861	0.705
comA	Streptococcus mitis SK321	67.461	99.304	0.67
comA	Streptococcus mitis NCTC 12261	67.181	99.304	0.667
comA	Streptococcus pneumoniae D39	66.76	99.304	0.663
comA	Streptococcus pneumoniae Rx1	66.76	99.304	0.663
comA	Streptococcus pneumoniae R6	66.76	99.304	0.663
comA	Streptococcus pneumoniae TIGR4	66.48	99.304	0.66
comA	Streptococcus gordonii str. Challis substr. CH1	65.077	99.304	0.646