Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   EQK21_RS04285 Genome accession   NZ_CP035110
Coordinates   835197..836468 (+) Length   423 a.a.
NCBI ID   WP_128530480.1    Uniprot ID   -
Organism   Latilactobacillus curvatus strain SRCM103465     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 830197..841468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQK21_RS04270 (EQK21_04270) - 830316..833063 (-) 2748 WP_128530478.1 YhgE/Pip domain-containing protein -
  EQK21_RS04275 (EQK21_04275) - 833377..834129 (+) 753 WP_089556574.1 isoprenyl transferase -
  EQK21_RS04280 (EQK21_04280) - 834144..834932 (+) 789 WP_128530479.1 phosphatidate cytidylyltransferase -
  EQK21_RS04285 (EQK21_04285) eeP 835197..836468 (+) 1272 WP_128530480.1 RIP metalloprotease RseP Regulator
  EQK21_RS04290 (EQK21_04290) - 836494..838215 (+) 1722 WP_128530481.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45877.50 Da        Isoelectric Point: 9.9214

>NTDB_id=334593 EQK21_RS04285 WP_128530480.1 835197..836468(+) (eeP) [Latilactobacillus curvatus strain SRCM103465]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQGTVQKINTSDKVTTLNGVPFQIAKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKTDDRLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRANQTKSLEITPKAVKVEGQKGKVGQIGVTAGLNHSVGAKLKYGFTQSWANATQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPALDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGIMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=334593 EQK21_RS04285 WP_128530480.1 835197..836468(+) (eeP) [Latilactobacillus curvatus strain SRCM103465]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTGGTGCATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCAAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTCCGCATGGCGGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGGGACTGTTCAAAAAATTAATACAAGTGACAAAGTAACTACGTTAAACGG
TGTCCCATTTCAAATTGCAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGACGAATCCGAAT
TAAAACGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAACGGATGACCGGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAATCAAACTAAGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGGCAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGGACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAAAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACGCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCAGCCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGCAAACCCATCTCACCTGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATCATGGTCGTCTTAATGGTCTTGGTTACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(205-258)

Peptidase family M50 (Peptidase_M50)

(6-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.605

100

0.494
  eeP Streptococcus thermophilus LMG 18311

48.605

100

0.494

Multiple sequence alignment