Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EPY81_RS13195 | Genome accession | NZ_CP035109 |
| Coordinates | 2728909..2729289 (+) | Length | 126 a.a. |
| NCBI ID | WP_086376637.1 | Uniprot ID | A0A8I1H4G2 |
| Organism | Acinetobacter pittii strain NQ-003 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2723909..2734289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPY81_RS13165 (EPY81_13310) | kdsB | 2724815..2725576 (+) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| EPY81_RS13170 (EPY81_13315) | holB | 2725590..2726570 (+) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| EPY81_RS13175 (EPY81_13320) | pilZ | 2726581..2726922 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| EPY81_RS13180 (EPY81_13325) | ycfH | 2726940..2727713 (+) | 774 | WP_005069538.1 | TatD family hydrolase | - |
| EPY81_RS13185 (EPY81_13330) | - | 2727750..2728358 (+) | 609 | WP_161511959.1 | TetR/AcrR family transcriptional regulator | - |
| EPY81_RS13190 (EPY81_13335) | - | 2728365..2728919 (+) | 555 | WP_005069534.1 | type II secretion system protein | - |
| EPY81_RS13195 (EPY81_13340) | xcpV | 2728909..2729289 (+) | 381 | WP_086376637.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EPY81_RS13200 (EPY81_13345) | xcpW | 2729289..2730044 (+) | 756 | WP_005069530.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EPY81_RS13205 (EPY81_13350) | gspK | 2730045..2731004 (+) | 960 | WP_005076277.1 | type II secretion system minor pseudopilin GspK | - |
| EPY81_RS13210 (EPY81_13355) | - | 2731232..2731828 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EPY81_RS13215 (EPY81_13360) | ung | 2731882..2732595 (+) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| EPY81_RS13220 (EPY81_13365) | hibch | 2732592..2733716 (+) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EPY81_RS13225 (EPY81_13370) | tadA | 2733722..2734225 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13964.11 Da Isoelectric Point: 9.4463
>NTDB_id=334574 EPY81_RS13195 WP_086376637.1 2728909..2729289(+) (xcpV) [Acinetobacter pittii strain NQ-003]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSTQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVALMEINQEWLEGTQSKQVTSQGETWQI
DKSTQSTISPNVQKVDVQVSLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=334574 EPY81_RS13195 WP_086376637.1 2728909..2729289(+) (xcpV) [Acinetobacter pittii strain NQ-003]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCAATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTACGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCAATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCACAGTTTGTCGCAATGAATGAAGTTG
CTTTAATGGAAATAAATCAGGAATGGCTCGAAGGTACACAAAGCAAGCAAGTGACTTCTCAAGGTGAGACTTGGCAGATT
GATAAATCTACGCAATCTACAATTAGTCCAAATGTTCAAAAAGTAGATGTACAAGTTAGTTTATATGATTCTGATAAGGG
GAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTACCCAATGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |