Detailed information NTG0334575

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EPY81_RS13200
• Genome accession: NZ_CP035109
• Coordinates: 2729289..2730044 (+)
• Length: 251 a.a.
• NCBI ID: WP_005069530.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain NQ-003
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2724289..2735044

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EPY81_RS13165 (EPY81_13310)	kdsB	2724815..2725576 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EPY81_RS13170 (EPY81_13315)	holB	2725590..2726570 (+)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
EPY81_RS13175 (EPY81_13320)	pilZ	2726581..2726922 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
EPY81_RS13180 (EPY81_13325)	ycfH	2726940..2727713 (+)	774	WP_005069538.1	TatD family hydrolase	-
EPY81_RS13185 (EPY81_13330)	-	2727750..2728358 (+)	609	WP_161511959.1	TetR/AcrR family transcriptional regulator	-
EPY81_RS13190 (EPY81_13335)	-	2728365..2728919 (+)	555	WP_005069534.1	type II secretion system protein	-
EPY81_RS13195 (EPY81_13340)	xcpV	2728909..2729289 (+)	381	WP_086376637.1	type II secretion system minor pseudopilin GspI	Machinery gene
EPY81_RS13200 (EPY81_13345)	xcpW	2729289..2730044 (+)	756	WP_005069530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EPY81_RS13205 (EPY81_13350)	gspK	2730045..2731004 (+)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
EPY81_RS13210 (EPY81_13355)	-	2731232..2731828 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
EPY81_RS13215 (EPY81_13360)	ung	2731882..2732595 (+)	714	WP_002121342.1	uracil-DNA glycosylase	-
EPY81_RS13220 (EPY81_13365)	hibch	2732592..2733716 (+)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
EPY81_RS13225 (EPY81_13370)	tadA	2733722..2734225 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
EPY81_RS13230 (EPY81_13375)	-	2734296..2734736 (+)	441	WP_002121449.1	SRPBCC family protein	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28682.93 Da
• Isoelectric Point: 9.5669

>NTDB_id=334575 EPY81_RS13200 WP_005069530.1 2729289..2730044(+) (xcpW) [Acinetobacter pittii strain NQ-003]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=334575 EPY81_RS13200 WP_005069530.1 2729289..2730044(+) (xcpW) [Acinetobacter pittii strain NQ-003]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80.4	99.602	0.801