Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SZO_RS01180 Genome accession   NC_012470
Coordinates   239849..241120 (+) Length   423 a.a.
NCBI ID   WP_012677327.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 234849..246120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SZO_RS01155 (SZO_01960) dexB 235527..237146 (+) 1620 WP_012677323.1 glucan 1,6-alpha-glucosidase DexB -
  SZO_RS01160 (SZO_01970) traF 237255..237617 (+) 363 WP_012677324.1 conjugal transfer protein TraF -
  SZO_RS01165 (SZO_01980) yajC 237731..238090 (+) 360 WP_012516346.1 preprotein translocase subunit YajC -
  SZO_RS01170 (SZO_01990) - 238264..239013 (+) 750 WP_012677325.1 isoprenyl transferase -
  SZO_RS01175 (SZO_02000) - 239023..239817 (+) 795 WP_012677326.1 phosphatidate cytidylyltransferase -
  SZO_RS01180 (SZO_02010) eeP 239849..241120 (+) 1272 WP_012677327.1 RIP metalloprotease RseP Regulator
  SZO_RS01185 (SZO_02020) - 241390..243246 (+) 1857 WP_012677328.1 proline--tRNA ligase -
  SZO_RS01190 (SZO_02030) - 243298..243855 (+) 558 WP_012677329.1 nucleotidyltransferase family protein -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46185.66 Da        Isoelectric Point: 5.9240

>NTDB_id=33446 SZO_RS01180 WP_012677327.1 239849..241120(+) (eeP) [Streptococcus equi subsp. zooepidemicus]
MLGIITFIIIFGILVIVHEFGHFYFAKRSGILVREFAIGMGPKLFSHVDQQGTLYTIRLLPLGGYVRMAGWGDDTTEIKT
GTPASLTLNDQGLVKRINLSQGKLDPTSLPMNVTAYDLEDKLTITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNASIGGRLITNFAGPMNNFILGIVVFILFAFVQGGVADYHSNHIRVVENGAAAKAGIRDNDQILEINHQKINDWYELTQ
AVTDSAADVKAKGKLEITYQTQTGDQVKTIALKPEKKGDQYLIGVQYPLKTSLTDKLIGGFEMAGNGALVIVTALKSLIT
SFSLDKLGGPVAMYQMSNQAAKNGLESVLSLMAMLSINLGIFNLIPIPALDGGKILMNVIEALRRKPLKQETETYITLAG
VAIMVVLMIAVTWNDIMRAFFQG

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=33446 SZO_RS01180 WP_012677327.1 239849..241120(+) (eeP) [Streptococcus equi subsp. zooepidemicus]
ATGTTAGGAATAATTACCTTTATTATTATTTTTGGTATTCTTGTGATTGTCCATGAGTTTGGCCATTTCTATTTTGCTAA
ACGATCTGGTATTTTGGTCAGAGAGTTTGCTATTGGCATGGGACCAAAACTCTTTTCGCATGTTGATCAGCAAGGAACGC
TTTACACGATCCGGCTATTACCGCTTGGTGGCTATGTGCGAATGGCAGGCTGGGGTGATGACACAACTGAGATAAAAACA
GGAACGCCTGCTAGCTTGACGCTCAATGACCAAGGTCTGGTCAAGCGGATTAATCTATCTCAGGGCAAGCTTGATCCGAC
TAGCCTGCCTATGAATGTGACTGCTTATGACTTAGAAGATAAGTTGACGATTACAGGGCTGGTTCTTGATGAGACCAAGA
CCTATTCGGTAGATCATGATGCTACCATTGTCGAGGAGGACGGTACAGAGATCCGGATTGCACCGCTTGATGTTCAGTAT
CAAAACGCAAGCATTGGCGGTCGTTTGATCACCAATTTTGCAGGACCTATGAATAATTTTATTCTAGGTATTGTTGTCTT
TATTTTGTTTGCCTTTGTTCAAGGTGGTGTGGCTGATTATCATAGCAACCATATTCGTGTGGTGGAAAATGGCGCAGCAG
CCAAGGCTGGTATTAGAGACAATGATCAGATTTTAGAGATTAATCATCAAAAGATTAATGACTGGTATGAGTTGACGCAG
GCCGTTACTGATTCAGCAGCAGATGTTAAGGCTAAGGGCAAGCTAGAGATTACCTATCAGACTCAGACAGGTGATCAGGT
TAAGACTATAGCACTGAAGCCTGAAAAAAAAGGCGATCAGTACCTTATTGGTGTCCAGTACCCACTAAAAACAAGTCTGA
CAGACAAGCTAATAGGTGGCTTTGAGATGGCTGGTAATGGTGCTCTAGTGATTGTCACTGCTCTAAAGAGTTTGATTACC
TCCTTTAGCCTAGATAAATTAGGTGGGCCAGTTGCCATGTATCAGATGTCCAATCAGGCAGCAAAGAATGGTTTAGAGTC
TGTCTTGTCCTTGATGGCAATGCTCTCTATCAATTTAGGGATTTTTAATTTGATTCCGATTCCCGCACTAGATGGTGGTA
AGATCCTGATGAATGTGATTGAAGCACTTCGTCGTAAGCCATTAAAGCAAGAGACAGAGACTTATATTACCCTTGCAGGT
GTTGCGATTATGGTGGTACTCATGATTGCAGTGACCTGGAACGATATTATGCGAGCCTTTTTCCAAGGCTGA

Domains


Predicted by InterproScan.

(6-407)

(206-237)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

68.409

99.527

0.681

  eeP Streptococcus thermophilus LMD-9

68.171

99.527

0.678


Multiple sequence alignment