Detailed information NTG0334005

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FRD49_RS16055
• Genome accession: NZ_CP042994
• Coordinates: 3346630..3347943 (-)
• Length: 437 a.a.
• NCBI ID: WP_004710673.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain J1A
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3341630..3352943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRD49_RS16040 (FRD49_16040)	-	3343522..3345048 (+)	1527	WP_002053445.1	fumarate hydratase	-
FRD49_RS16045 (FRD49_16045)	-	3345187..3345741 (+)	555	WP_004710671.1	DUF2059 domain-containing protein	-
FRD49_RS16050 (FRD49_16050)	-	3345766..3346482 (-)	717	WP_004710672.1	DUF2846 domain-containing protein	-
FRD49_RS16055 (FRD49_16055)	clpX	3346630..3347943 (-)	1314	WP_004710673.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FRD49_RS16060 (FRD49_16060)	clpP	3348045..3348650 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
FRD49_RS16065 (FRD49_16065)	tig	3348845..3350179 (-)	1335	WP_002053278.1	trigger factor	-
FRD49_RS16070 (FRD49_16070)	-	3350595..3352886 (+)	2292	WP_032009845.1	TonB-dependent receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48064.90 Da
• Isoelectric Point: 5.0785

>NTDB_id=334005 FRD49_RS16055 WP_004710673.1 3346630..3347943(-) (clpX) [Acinetobacter nosocomialis strain J1A]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKKDESKKIAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKPERQPKEAATHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=334005 FRD49_RS16055 WP_004710673.1 3346630..3347943(-) (clpX) [Acinetobacter nosocomialis strain J1A]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
CGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGACCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTGGCTCGTT
TGTTAGATGTTCCATTTGCGATGGCAGATGCGACCACTTTAACTGAAGCGGGTTATGTCGGCGAAGACGTTGAAAATATT
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTATATCGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCTTCGATTACGCGTGACGTTTCTGGTGAAGGTGTACAACAAGCATTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAACATCCGCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATCTTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAACGCCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGACGTGAAGAAAAAAGATGAAAGCAAGAAAATTGCTGAACTGTTCCGTCAAGTTGAGCCAACTGACTTAG
TGAAATTTGGTTTGATCCCAGAATTTATTGGTCGTTTACCAGTTATTGCAACGCTTGAAGAGCTTGATGAAGAAGCATTA
ATGCAAATTTTGACAGAACCAAAAAATGCATTAACTCGTCAATACCAATACTTGTTCAATATGGAAAATGTTGACCTTGT
ATTTGAAGATTCAGCTTTACGTGCAGTTGCTAAGCGAGCGCTTGAGCGTAATACCGGAGCTCGTGGTCTACGTTCGATTT
TGGAAAATGTTTTACTTGAAACAATGTATGACTTACCAAGTCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTG
ATTAATGGTGAAGCTGAGCCTGTTTACAAGCCAGAACGCCAGCCTAAAGAAGCAGCAACTCATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	60.15	91.304	0.549
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.683	92.449	0.524