Detailed information NTG0333956

Bioinformatically predicted

Overview

• Name: pilW
• Type: Machinery gene
• Locus tag: FRD49_RS01790
• Genome accession: NZ_CP042994
• Coordinates: 377262..378299 (+)
• Length: 345 a.a.
• NCBI ID: WP_031955976.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain J1A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 372262..383299

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FRD49_RS01760 (FRD49_01760)	-	373922..374053 (-)	132	WP_102990545.1	hypothetical protein	-
FRD49_RS01765 (FRD49_01765)	rpoZ	374092..374370 (-)	279	WP_000135049.1	DNA-directed RNA polymerase subunit omega	-
FRD49_RS01770 (FRD49_01770)	gmk	374443..375072 (-)	630	WP_002051739.1	guanylate kinase	-
FRD49_RS01775 (FRD49_01775)	ispH	375195..376145 (+)	951	WP_002051768.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
FRD49_RS01780 (FRD49_01780)	fimU	376314..376763 (+)	450	WP_148356612.1	GspH/FimT family pseudopilin	Machinery gene
FRD49_RS01785 (FRD49_01785)	pilV	376760..377260 (+)	501	WP_079377472.1	type IV pilus modification protein PilV	Machinery gene
FRD49_RS01790 (FRD49_01790)	pilW	377262..378299 (+)	1038	WP_031955976.1	PilW family protein	Machinery gene
FRD49_RS01795 (FRD49_01795)	-	378296..379078 (+)	783	WP_148356613.1	pilus assembly PilX N-terminal domain-containing protein	-
FRD49_RS01800 (FRD49_01800)	-	379094..382768 (+)	3675	WP_148356614.1	PilC/PilY family type IV pilus protein	-
FRD49_RS01805 (FRD49_01805)	comE	382782..383258 (+)	477	WP_039246155.1	type IV pilin protein	Machinery gene

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37313.21 Da
• Isoelectric Point: 6.9578

>NTDB_id=333956 FRD49_RS01790 WP_031955976.1 377262..378299(+) (pilW) [Acinetobacter nosocomialis strain J1A]
MKKNQGFTLIELILSLALGLIITAAAILLFLTSQKSLSMQIGVSDVQDNANFGLNYLTQDIRLANLNNPKAVINDQTAYG
GIVLTSAVNSAKDAANEPLSNLYKTIVGVTASTNLLSRSQGDSVGSGNTWTGASNVQSNGSDIASDQLVIQYVPQYTIDT
KGTATQADDEYIGGTDCEGNNLNFPLASGRQVIVERYFLRKDANNTTDEPNQPLALACDAGYYPLTGNPTAITRYGDAGE
IIMKRVDYFRVLLNVQGSSGRRYISIHDYLSLTAPRPRIVSVQIGLLTRSLQPVGAEVAIKDDQKFSVLDQTIIVKKPTN
STKKYVRQVISQTIALRNVIGERGE

Nucleotide

• Length: 1038 bp

>NTDB_id=333956 FRD49_RS01790 WP_031955976.1 377262..378299(+) (pilW) [Acinetobacter nosocomialis strain J1A]
ATGAAAAAAAATCAGGGTTTTACATTAATCGAACTCATACTTTCGTTAGCTTTAGGTCTGATAATTACAGCCGCTGCAAT
ATTATTGTTTTTGACTAGTCAAAAAAGTTTATCAATGCAGATAGGTGTTTCCGATGTACAGGATAATGCTAATTTTGGGC
TTAACTATTTAACCCAAGATATTCGCCTTGCGAATTTAAATAATCCTAAAGCAGTTATTAATGATCAAACTGCGTACGGC
GGTATTGTCTTAACCTCTGCAGTTAACTCAGCTAAAGATGCTGCTAATGAGCCTCTTAGTAATCTTTATAAAACCATTGT
TGGTGTAACAGCCAGTACTAATTTACTTTCACGCAGTCAAGGCGATAGTGTTGGTAGTGGTAATACTTGGACTGGAGCAT
CAAACGTCCAAAGTAATGGAAGTGATATTGCCAGTGATCAACTCGTTATTCAATATGTACCGCAATATACAATTGATACA
AAAGGTACAGCAACTCAAGCTGACGATGAATATATAGGTGGTACAGATTGCGAAGGAAACAATTTGAATTTTCCTCTTGC
AAGTGGGCGCCAAGTTATAGTTGAACGATATTTTCTACGTAAAGATGCTAATAACACTACTGATGAACCCAATCAACCCT
TAGCACTAGCTTGTGATGCCGGTTATTACCCATTAACGGGTAATCCAACTGCTATCACACGTTATGGGGATGCGGGTGAA
ATTATAATGAAACGCGTAGATTATTTCCGAGTTTTACTGAATGTTCAGGGGAGTTCAGGGCGACGTTATATTTCAATACA
TGATTATTTGAGTTTAACAGCTCCTCGTCCACGTATTGTTTCGGTACAAATTGGATTATTAACTCGTTCATTGCAACCAG
TCGGTGCAGAAGTAGCAATTAAAGATGATCAAAAATTTTCAGTATTGGATCAAACGATTATAGTTAAAAAGCCTACAAAT
TCTACAAAAAAATATGTGCGGCAAGTGATATCACAAACCATCGCTTTACGTAATGTAATCGGGGAGCGTGGTGAATGA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

• Type IV Pilus-assembly protein W (PilW) (197-338)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilW	Acinetobacter baumannii D1279779	38.655	100	0.4