Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   EMO93_RS13045 Genome accession   NZ_CP035003
Coordinates   2580236..2581222 (+) Length   328 a.a.
NCBI ID   WP_000959279.1    Uniprot ID   A0A2S6DCY7
Organism   Staphylococcus aureus strain PCFA-221     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 2575236..2586222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EMO93_RS13020 - 2575771..2576718 (+) 948 WP_000121214.1 IS30-like element ISSau1 family transposase -
  EMO93_RS13025 - 2576735..2577226 (+) 492 Protein_2432 ABC transporter substrate-binding protein -
  EMO93_RS13030 trpS 2577346..2578335 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  EMO93_RS13035 spxA 2578630..2579025 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  EMO93_RS13040 mecA 2579396..2580115 (+) 720 WP_001217731.1 adaptor protein MecA -
  EMO93_RS13045 coiA 2580236..2581222 (+) 987 WP_000959279.1 competence protein CoiA Machinery gene
  EMO93_RS13050 pepF 2581270..2583078 (+) 1809 WP_000082727.1 oligoendopeptidase F -
  EMO93_RS13055 yjbH 2583538..2584344 (-) 807 WP_128382695.1 protease adaptor protein YjbH -
  EMO93_RS13060 - 2584367..2584732 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  EMO93_RS13065 - 2584836..2585429 (-) 594 WP_000224612.1 CYTH domain-containing protein -
  EMO93_RS13070 - 2585615..2585962 (+) 348 WP_001242104.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38800.32 Da        Isoelectric Point: 9.4277

>NTDB_id=333909 EMO93_RS13045 WP_000959279.1 2580236..2581222(+) (coiA) [Staphylococcus aureus strain PCFA-221]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPISYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNVKMSELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGESILVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=333909 EMO93_RS13045 WP_000959279.1 2580236..2581222(+) (coiA) [Staphylococcus aureus strain PCFA-221]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTTCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGTCAAAATGAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAGAAAGCATATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCGATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S6DCY7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.037

100

0.96
  coiA Staphylococcus aureus MW2

96.037

100

0.96

Multiple sequence alignment