Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   EO946_RS06185 Genome accession   NZ_CP034943
Coordinates   1199013..1200164 (+) Length   383 a.a.
NCBI ID   WP_003224605.1    Uniprot ID   -
Organism   Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1194013..1205164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EO946_RS06150 (EO946_06150) - 1194676..1195890 (+) 1215 WP_079996334.1 MFS transporter -
  EO946_RS06155 (EO946_06155) - 1196068..1196646 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  EO946_RS06160 (EO946_06160) spx 1196827..1197222 (+) 396 WP_003224599.1 transcriptional regulator Spx -
  EO946_RS06165 (EO946_06165) - 1197265..1197921 (-) 657 WP_003224601.1 TerC family protein -
  EO946_RS06170 (EO946_06170) - 1198105..1198230 (+) 126 WP_120698858.1 hypothetical protein -
  EO946_RS06175 (EO946_06175) mecA 1198197..1198853 (+) 657 WP_003224603.1 adaptor protein MecA Regulator
  EO946_RS06180 (EO946_06180) - 1198848..1198969 (-) 122 Protein_1148 hypothetical protein -
  EO946_RS06185 (EO946_06185) coiA 1199013..1200164 (+) 1152 WP_003224605.1 competence protein CoiA Machinery gene
  EO946_RS06190 (EO946_06190) pepF 1200394..1202223 (+) 1830 WP_171017002.1 oligoendopeptidase F -
  EO946_RS06195 (EO946_06195) - 1202261..1202428 (-) 168 WP_019713977.1 hypothetical protein -
  EO946_RS06205 (EO946_06205) spxH 1202742..1203641 (-) 900 WP_003224611.1 protease adaptor protein SpxH -
  EO946_RS06210 (EO946_06210) - 1203638..1204036 (-) 399 WP_003224612.1 group 2 truncated hemoglobin YjbI -
  EO946_RS06215 (EO946_06215) - 1204291..1205028 (-) 738 WP_003224614.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44559.70 Da        Isoelectric Point: 10.1263

>NTDB_id=333569 EO946_RS06185 WP_003224605.1 1199013..1200164(+) (coiA) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MFSAVTEDGQIFHLLGARQSRKLKGRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQQASPILEPYIKNINQRPDIMAKIKGRMLAVEYQCATLAPDVFQKRTEGFKQAGIIPQWIVGRSRLKRSAPSFYQLSAF
HWQFINASSYRELICYCPETRSFRRLSHIIPFYTNHSYSSVQTIPIHRAAANDLFFTEPTPAFQYSGWTKAIHRFRHKPH
RFISKETNRLRLLFYEKRQTPLSFLPTEVFVPVIKGAVFNSPVFVWQGFLYLFITDLGYKRAPIRFSAVLQQCKLHIHKK
NISLRYKCSEDCLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAEGVRSLQDLIESDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=333569 EO946_RS06185 WP_003224605.1 1199013..1200164(+) (coiA) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATATTTCACCTTCTAGGCGCTCGGCAAAGCCGGAAATTAAAGGGAAGACG
ATTCTTCTGCCCGGTGTGCGGAGGTGAGCTTGCTGTGAAGCTCGGTCTCCAAAAAGCACCGCATTTCGCCCATAAACAGA
ACAAATCCTGTTCGATAGACATAGAACCGGAAAGCGCCTACCACTTAGAAGGAAAGAGACAACTGTATGTATGGCTGAAA
ACGCAACAGGCTTCCCCGATATTAGAACCGTATATCAAAAACATCAATCAAAGACCGGACATCATGGCAAAGATCAAGGG
GCGCATGCTTGCTGTTGAGTATCAATGTGCCACTCTTGCTCCAGATGTCTTTCAAAAACGGACAGAGGGCTTCAAACAAG
CAGGAATCATCCCGCAGTGGATTGTGGGACGCAGCCGCTTAAAACGCTCTGCTCCATCCTTTTATCAGCTTTCTGCTTTC
CATTGGCAGTTTATCAATGCAAGTTCATACAGGGAACTGATATGTTATTGCCCGGAAACACGTTCTTTCCGCCGGCTCAG
CCACATCATTCCGTTTTACACAAACCATTCTTATTCCTCTGTTCAAACGATCCCTATCCATCGGGCTGCTGCAAACGATC
TTTTTTTTACTGAACCGACGCCCGCATTTCAATATTCTGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGATTTATCTCCAAGGAAACAAATCGCCTCAGGCTGCTGTTTTATGAAAAGCGGCAGACGCCCCTTTCTTTTCTTCCGAC
GGAAGTGTTTGTCCCTGTTATAAAAGGGGCTGTTTTTAATAGCCCGGTTTTTGTGTGGCAGGGGTTTCTATATCTGTTTA
TTACGGATCTGGGATATAAACGTGCGCCAATTCGCTTTTCAGCCGTTTTACAGCAGTGCAAACTGCACATTCATAAAAAG
AACATTTCGCTCAGATACAAATGCAGCGAAGATTGTCTTTCTGAAGCGGTGAAACAGTACATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGAGGGCGTACGCTCATTACAGGATCTCA
TAGAAAGTGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

88.204

97.389

0.859


Multiple sequence alignment