Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   EO946_RS02010 Genome accession   NZ_CP034943
Coordinates   369379..369777 (-) Length   132 a.a.
NCBI ID   WP_003224919.1    Uniprot ID   E0U2B3
Organism   Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 364379..374777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EO946_RS20930 - 365208..365335 (+) 128 Protein_340 hypothetical protein -
  EO946_RS01980 (EO946_01980) - 365332..365787 (+) 456 WP_003224877.1 RDD family protein -
  EO946_RS01985 (EO946_01985) - 365870..366202 (+) 333 WP_003224878.1 YckD family protein -
  EO946_RS01990 (EO946_01990) - 366337..366759 (+) 423 WP_003224879.1 MarR family winged helix-turn-helix transcriptional regulator -
  EO946_RS01995 (EO946_01995) - 366747..367088 (+) 342 WP_003224880.1 DUF3147 family protein -
  EO946_RS02000 (EO946_02000) - 367108..367836 (+) 729 WP_003224881.1 AAA family ATPase -
  EO946_RS02005 (EO946_02005) bglC 367909..369342 (+) 1434 WP_003224917.1 6-phospho-beta-glucosidase -
  EO946_RS02010 (EO946_02010) nin/comJ 369379..369777 (-) 399 WP_003224919.1 DNA-entry nuclease inhibitor Regulator
  EO946_RS02015 (EO946_02015) nucA/comI 369800..370249 (-) 450 WP_136975843.1 DNA-entry nuclease Machinery gene
  EO946_RS02020 (EO946_02020) tlpC 370423..372147 (-) 1725 WP_003224925.1 methyl-accepting chemotaxis protein TlpC -
  EO946_RS02025 (EO946_02025) hxlB 372260..372817 (-) 558 WP_003224927.1 6-phospho-3-hexuloisomerase -
  EO946_RS02030 (EO946_02030) hxlA 372822..373454 (-) 633 WP_003224929.1 3-hexulose-6-phosphate synthase -
  EO946_RS02035 (EO946_02035) hxlR 373685..374047 (+) 363 WP_003224931.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14899.87 Da        Isoelectric Point: 4.4698

>NTDB_id=333550 EO946_RS02010 WP_003224919.1 369379..369777(-) (nin/comJ) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
QVTENGIEIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=333550 EO946_RS02010 WP_003224919.1 369379..369777(-) (nin/comJ) [Bacillus spizizenii ATCC 6633 = JCM 2499 strain ATCC 6633]
TTGATCAAGTCATGGAAGCCACAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTTGCTGCGGCGGACGGAGCGATTTCATTTGAAGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CAAGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCATGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E0U2B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962


Multiple sequence alignment