Detailed information NTG0332774

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: CA897_RS00975
• Genome accession: NZ_CP042899
• Coordinates: 218621..219604 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain CFSAN061763
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 213621..224604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA897_RS00960 (CA897_000965)	dppA	214921..216528 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
CA897_RS00965 (CA897_000975)	dppB	216679..217698 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
CA897_RS00970 (CA897_000980)	dppC	217708..218610 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
CA897_RS00975 (CA897_000985)	amiE	218621..219604 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
CA897_RS00980 (CA897_000990)	dppF	219601..220605 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
CA897_RS00985 (CA897_000995)	yhjV	220635..221906 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
CA897_RS00990 (CA897_001005)	-	222382..222489 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
CA897_RS00995 (CA897_001015)	-	222866..222973 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
CA897_RS01000 (CA897_001025)	-	223349..223456 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=332774 CA897_RS00975 WP_001196487.1 218621..219604(+) (amiE) [Escherichia coli strain CFSAN061763]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=332774 CA897_RS00975 WP_001196487.1 218621..219604(+) (amiE) [Escherichia coli strain CFSAN061763]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407