Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ELR50_RS15340 Genome accession   NZ_CP034688
Coordinates   3425778..3426185 (-) Length   135 a.a.
NCBI ID   WP_009615249.1    Uniprot ID   A0A024H9X0
Organism   Pseudomonas citronellolis strain WXP-4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3420778..3431185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELR50_RS15320 (ELR50_15240) - 3421737..3422594 (-) 858 WP_061560519.1 protein-glutamate O-methyltransferase -
  ELR50_RS15325 (ELR50_15245) - 3422654..3424702 (-) 2049 WP_043269485.1 methyl-accepting chemotaxis protein -
  ELR50_RS15330 (ELR50_15250) - 3424786..3425322 (-) 537 WP_009615258.1 chemotaxis protein CheW -
  ELR50_RS15335 (ELR50_15255) pilH 3425368..3425733 (-) 366 WP_009615257.1 twitching motility response regulator PilH -
  ELR50_RS15340 (ELR50_15260) pilG 3425778..3426185 (-) 408 WP_009615249.1 twitching motility response regulator PilG Regulator
  ELR50_RS15345 (ELR50_15265) gshB 3426433..3427404 (+) 972 WP_043317848.1 glutathione synthase -
  ELR50_RS15350 (ELR50_15270) - 3427489..3428382 (+) 894 WP_009615247.1 energy transducer TonB -
  ELR50_RS15355 (ELR50_15275) - 3428432..3428998 (+) 567 WP_009615246.1 YqgE/AlgH family protein -
  ELR50_RS15360 (ELR50_15280) ruvX 3428998..3429426 (+) 429 WP_009615245.1 Holliday junction resolvase RuvX -
  ELR50_RS15365 (ELR50_15285) pyrR 3429547..3430056 (+) 510 WP_009615244.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ELR50_RS15370 (ELR50_15290) - 3430096..3431100 (+) 1005 WP_043269491.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7119

>NTDB_id=332545 ELR50_RS15340 WP_009615249.1 3425778..3426185(-) (pilG) [Pseudomonas citronellolis strain WXP-4]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=332545 ELR50_RS15340 WP_009615249.1 3425778..3426185(-) (pilG) [Pseudomonas citronellolis strain WXP-4]
ATGGAACAGCATTCCGATGGTTTGAAGGTGATGGTCATCGACGATTCCAAGACGATCCGTCGTACCGCCGAAACCCTGCT
CAAGAAAGTCGGCTGCGATGTCATCACGGCCATCGATGGCTTCGACGCGCTGGCGAAGATCGCCGACACCCATCCGAACA
TCATCTTCGTCGACATCATGATGCCTCGGCTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGTATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGACCCACGTGCCCGACTTCACCCCGGTGGAGCAAG
CTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A024H9X0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696

  vicR Streptococcus mutans UA159

42.063

93.333

0.393


Multiple sequence alignment