Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EKQ63_RS22150 Genome accession   NZ_CP034686
Coordinates   3864183..3864977 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus sp. BD59S     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3859183..3869977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EKQ63_RS22120 (EKQ63_22100) yqiS 3859402..3860301 (-) 900 WP_143881493.1 phosphate butyryltransferase -
  EKQ63_RS22130 (EKQ63_22110) - 3860497..3862569 (-) 2073 WP_048550748.1 sigma-54 interaction domain-containing protein -
  EKQ63_RS22135 (EKQ63_22115) - 3862706..3862939 (+) 234 WP_001190188.1 DUF2627 domain-containing protein -
  EKQ63_RS22140 (EKQ63_22120) - 3862989..3863717 (-) 729 WP_143881495.1 glycerophosphodiester phosphodiesterase -
  EKQ63_RS22145 (EKQ63_22125) - 3863769..3863915 (+) 147 WP_001247671.1 YycC family protein -
  EKQ63_RS22150 (EKQ63_22130) spo0A 3864183..3864977 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  EKQ63_RS22160 (EKQ63_22140) spoIVB 3865265..3866563 (-) 1299 WP_002028467.1 SpoIVB peptidase -
  EKQ63_RS22165 (EKQ63_22145) recN 3866682..3868421 (-) 1740 WP_000947752.1 DNA repair protein RecN Machinery gene
  EKQ63_RS22170 (EKQ63_22150) argR 3868689..3869138 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=332497 EKQ63_RS22150 WP_014297988.1 3864183..3864977(-) (spo0A) [Bacillus sp. BD59S]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=332497 EKQ63_RS22150 WP_014297988.1 3864183..3864977(-) (spo0A) [Bacillus sp. BD59S]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCAGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822

Multiple sequence alignment