Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SPP_RS09315 Genome accession   NC_012467
Coordinates   1750623..1751333 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae P1031     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1745623..1756333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPP_RS09300 (SPP_1882) - 1746278..1746526 (-) 249 WP_000364990.1 YneF family protein -
  SPP_RS09305 (SPP_1883) treC 1746668..1748293 (-) 1626 WP_000171230.1 alpha,alpha-phosphotrehalase -
  SPP_RS09310 (SPP_1884) treP 1748471..1750438 (-) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  SPP_RS09315 (SPP_1885) treR 1750623..1751333 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  SPP_RS09320 (SPP_1886) - 1751366..1752169 (-) 804 WP_000157674.1 ABC transporter ATP-binding protein -
  SPP_RS12850 (SPP_1887) - 1752182..1753059 (-) 878 Protein_1795 ABC transporter permease -
  SPP_RS09330 (SPP_1889) - 1753071..1753880 (-) 810 Protein_1796 ABC transporter substrate-binding protein -
  SPP_RS09335 (SPP_1892) amiF 1754500..1755426 (-) 927 WP_001291296.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=33244 SPP_RS09315 WP_000760673.1 1750623..1751333(+) (treR) [Streptococcus pneumoniae P1031]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=33244 SPP_RS09315 WP_000760673.1 1750623..1751333(+) (treR) [Streptococcus pneumoniae P1031]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593

Multiple sequence alignment