Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | DYL72_RS10410 | Genome accession | NZ_CP034672 |
| Coordinates | 2165739..2166356 (-) | Length | 205 a.a. |
| NCBI ID | WP_017043694.1 | Uniprot ID | A0A233HMW8 |
| Organism | Vibrio anguillarum strain J360 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2160739..2171356
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DYL72_RS10400 (DYL72_10400) | aceF | 2162010..2163893 (+) | 1884 | WP_019282813.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| DYL72_RS10405 (DYL72_10405) | lpdA | 2164194..2165621 (+) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| DYL72_RS10410 (DYL72_10410) | opaR | 2165739..2166356 (-) | 618 | WP_017043694.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| DYL72_RS10415 (DYL72_10415) | hpt | 2166728..2167258 (+) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| DYL72_RS10420 (DYL72_10420) | can | 2167346..2168014 (-) | 669 | WP_010319545.1 | carbonate dehydratase | - |
| DYL72_RS10425 (DYL72_10425) | - | 2168264..2169931 (+) | 1668 | WP_043004678.1 | SulP family inorganic anion transporter | - |
| DYL72_RS10430 (DYL72_10430) | - | 2170065..2170985 (+) | 921 | WP_029388351.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23672.24 Da Isoelectric Point: 6.1461
>NTDB_id=332388 DYL72_RS10410 WP_017043694.1 2165739..2166356(-) (opaR) [Vibrio anguillarum strain J360]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDQHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=332388 DYL72_RS10410 WP_017043694.1 2165739..2166356(-) (opaR) [Vibrio anguillarum strain J360]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGCGTACTCGTGAAAAGCTACCTCAGTATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCCCT
TGAAGTGTTTGCAACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCTACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCAACATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGCATACAAGACGAAGCCAGCAT
GGGCGTACTCGTGAAAAGCTACCTCAGTATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
82.178 |
98.537 |
0.81 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |