Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EHW89_RS01510 Genome accession   NZ_CP034543
Coordinates   289878..290609 (+) Length   243 a.a.
NCBI ID   WP_126466480.1    Uniprot ID   A0A3Q9F1S1
Organism   Streptococcus periodonticum strain KCOM 2412     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 284878..295609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHW89_RS01480 (EHW89_01480) - 285297..286736 (+) 1440 WP_126466476.1 NCS2 family permease -
  EHW89_RS01485 (EHW89_01485) tsaE 286979..287419 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EHW89_RS01490 (EHW89_01490) - 287412..287933 (+) 522 WP_126466477.1 GNAT family N-acetyltransferase -
  EHW89_RS01495 (EHW89_01495) brpA 287940..289055 (+) 1116 WP_126466478.1 biofilm formation/cell division transcriptional regulator BrpA -
  EHW89_RS01500 (EHW89_01500) - 289102..289389 (-) 288 WP_126466479.1 hypothetical protein -
  EHW89_RS01505 (EHW89_01505) - 289399..289809 (-) 411 WP_049517075.1 HIT family protein -
  EHW89_RS01510 (EHW89_01510) pptA 289878..290609 (+) 732 WP_126466480.1 ABC transporter ATP-binding protein Regulator
  EHW89_RS01515 (EHW89_01515) pptB 290606..291652 (+) 1047 WP_126466481.1 ABC transporter permease Regulator
  EHW89_RS01520 (EHW89_01520) ccrZ 291703..292500 (+) 798 WP_049508676.1 cell cycle regulator CcrZ -
  EHW89_RS01525 (EHW89_01525) trmB 292497..293132 (+) 636 WP_126466482.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  EHW89_RS01530 (EHW89_01530) - 293904..294593 (+) 690 WP_126468033.1 VIT family protein -
  EHW89_RS01535 (EHW89_01535) rimP 294844..295332 (+) 489 WP_126466483.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26803.37 Da        Isoelectric Point: 4.7226

>NTDB_id=331760 EHW89_RS01510 WP_126466480.1 289878..290609(+) (pptA) [Streptococcus periodonticum strain KCOM 2412]
MLEIKGLTGGYVNIPVLKNISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELQAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=331760 EHW89_RS01510 WP_126466480.1 289878..290609(+) (pptA) [Streptococcus periodonticum strain KCOM 2412]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAAACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGACAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCGCGCGTGGAGAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACAAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9F1S1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708
  pptA Streptococcus salivarius strain HSISS4

71.548

98.354

0.704

Multiple sequence alignment