Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FGL89_RS06085 | Genome accession | NZ_CP042374 |
| Coordinates | 1211976..1212932 (+) | Length | 318 a.a. |
| NCBI ID | WP_014974863.1 | Uniprot ID | K0DBK9 |
| Organism | Leuconostoc carnosum strain CBA3620 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1206976..1217932
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL89_RS06065 (FGL89_06065) | - | 1207202..1208308 (+) | 1107 | WP_014974867.1 | sensor histidine kinase | - |
| FGL89_RS06070 (FGL89_06070) | - | 1208295..1209572 (+) | 1278 | WP_014974866.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| FGL89_RS06075 (FGL89_06075) | nagB | 1209701..1210402 (+) | 702 | WP_014974865.1 | glucosamine-6-phosphate deaminase | - |
| FGL89_RS06080 (FGL89_06080) | - | 1210526..1211878 (+) | 1353 | WP_014974864.1 | glucose-6-phosphate isomerase | - |
| FGL89_RS06085 (FGL89_06085) | comGA | 1211976..1212932 (+) | 957 | WP_014974863.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGL89_RS06090 (FGL89_06090) | - | 1212874..1213911 (+) | 1038 | WP_014974862.1 | type II secretion system F family protein | - |
| FGL89_RS06095 (FGL89_06095) | comGC | 1213908..1214219 (+) | 312 | WP_014974861.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGL89_RS06100 (FGL89_06100) | - | 1214203..1214595 (+) | 393 | WP_014974860.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| FGL89_RS06105 (FGL89_06105) | - | 1214609..1214782 (+) | 174 | WP_186727194.1 | hypothetical protein | - |
| FGL89_RS06110 (FGL89_06110) | - | 1214766..1215182 (+) | 417 | WP_186727195.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| FGL89_RS06115 (FGL89_06115) | - | 1215183..1215479 (+) | 297 | WP_014974857.1 | hypothetical protein | - |
| FGL89_RS06120 (FGL89_06120) | - | 1215511..1216524 (+) | 1014 | WP_014974856.1 | class I SAM-dependent methyltransferase | - |
| FGL89_RS06125 (FGL89_06125) | - | 1216651..1217907 (+) | 1257 | WP_014974855.1 | acetate/propionate family kinase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 36314.85 Da Isoelectric Point: 6.3075
>NTDB_id=331536 FGL89_RS06085 WP_014974863.1 1211976..1212932(+) (comGA) [Leuconostoc carnosum strain CBA3620]
MNDILEAAIEQKVNDIYLLPTEDQQYVIKFHLDGQAVTFKQISEINAQTMISALKYRAKMNISERRRPQLGRFQNDEIWL
RVSTVGDFLNRETVVLRLIYPQRQTQNWLVSQQFEAIQTALPSAGLFLISGPTGSGKTTTLYRLLDQLADDKLVLTIEDP
VEIQQPKFVQLQVNEDAGIYYDELIKVALRHRPEILLVGEIRDKKTAQAAVQAALSGHLVLSTVHAMSARDVIVRLQDLG
VDHMKLMAALAGVVYQRLLPTNNHQQAAIMDMLNDHLLERVMRGDEIPKFSKKWQEVLQHAMDQQIISQETCETYQKL
MNDILEAAIEQKVNDIYLLPTEDQQYVIKFHLDGQAVTFKQISEINAQTMISALKYRAKMNISERRRPQLGRFQNDEIWL
RVSTVGDFLNRETVVLRLIYPQRQTQNWLVSQQFEAIQTALPSAGLFLISGPTGSGKTTTLYRLLDQLADDKLVLTIEDP
VEIQQPKFVQLQVNEDAGIYYDELIKVALRHRPEILLVGEIRDKKTAQAAVQAALSGHLVLSTVHAMSARDVIVRLQDLG
VDHMKLMAALAGVVYQRLLPTNNHQQAAIMDMLNDHLLERVMRGDEIPKFSKKWQEVLQHAMDQQIISQETCETYQKL
Nucleotide
Download Length: 957 bp
>NTDB_id=331536 FGL89_RS06085 WP_014974863.1 1211976..1212932(+) (comGA) [Leuconostoc carnosum strain CBA3620]
ATGAATGATATTTTAGAGGCAGCTATTGAACAAAAAGTAAATGATATTTATCTTTTACCCACCGAGGATCAACAATATGT
GATTAAGTTTCATCTTGATGGTCAAGCAGTGACATTTAAACAAATATCTGAAATAAATGCGCAAACAATGATTTCAGCGC
TTAAATATCGTGCCAAAATGAATATTTCAGAACGCAGGCGACCACAATTAGGTCGTTTTCAAAATGATGAGATTTGGCTA
CGTGTATCTACTGTTGGTGATTTTTTGAACCGAGAAACAGTTGTTTTGCGACTTATTTATCCGCAAAGGCAGACACAAAA
TTGGCTCGTTTCTCAACAGTTTGAAGCAATACAGACAGCATTGCCGAGTGCAGGTCTATTTTTAATTTCTGGGCCAACAG
GGTCCGGGAAAACAACAACTCTTTATCGTCTATTAGACCAATTAGCAGATGATAAACTCGTATTGACAATTGAAGATCCA
GTTGAAATTCAACAACCAAAATTTGTGCAATTACAAGTTAATGAAGATGCTGGTATTTATTATGATGAGTTAATCAAAGT
AGCACTACGACATCGACCAGAAATCTTATTAGTAGGTGAAATTCGTGATAAGAAAACGGCGCAGGCAGCCGTTCAAGCCG
CACTAAGTGGGCATTTGGTATTAAGTACTGTGCATGCTATGTCAGCACGTGATGTTATTGTACGGTTACAGGATCTAGGC
GTCGATCATATGAAACTAATGGCGGCATTGGCTGGTGTTGTTTATCAACGTTTATTGCCAACTAACAACCATCAACAAGC
AGCCATCATGGATATGCTCAATGATCATCTACTTGAACGTGTTATGCGTGGTGATGAGATTCCTAAATTTTCAAAAAAAT
GGCAGGAGGTGTTACAACATGCAATGGATCAGCAAATTATTTCGCAAGAAACATGTGAAACCTATCAAAAGCTTTAG
ATGAATGATATTTTAGAGGCAGCTATTGAACAAAAAGTAAATGATATTTATCTTTTACCCACCGAGGATCAACAATATGT
GATTAAGTTTCATCTTGATGGTCAAGCAGTGACATTTAAACAAATATCTGAAATAAATGCGCAAACAATGATTTCAGCGC
TTAAATATCGTGCCAAAATGAATATTTCAGAACGCAGGCGACCACAATTAGGTCGTTTTCAAAATGATGAGATTTGGCTA
CGTGTATCTACTGTTGGTGATTTTTTGAACCGAGAAACAGTTGTTTTGCGACTTATTTATCCGCAAAGGCAGACACAAAA
TTGGCTCGTTTCTCAACAGTTTGAAGCAATACAGACAGCATTGCCGAGTGCAGGTCTATTTTTAATTTCTGGGCCAACAG
GGTCCGGGAAAACAACAACTCTTTATCGTCTATTAGACCAATTAGCAGATGATAAACTCGTATTGACAATTGAAGATCCA
GTTGAAATTCAACAACCAAAATTTGTGCAATTACAAGTTAATGAAGATGCTGGTATTTATTATGATGAGTTAATCAAAGT
AGCACTACGACATCGACCAGAAATCTTATTAGTAGGTGAAATTCGTGATAAGAAAACGGCGCAGGCAGCCGTTCAAGCCG
CACTAAGTGGGCATTTGGTATTAAGTACTGTGCATGCTATGTCAGCACGTGATGTTATTGTACGGTTACAGGATCTAGGC
GTCGATCATATGAAACTAATGGCGGCATTGGCTGGTGTTGTTTATCAACGTTTATTGCCAACTAACAACCATCAACAAGC
AGCCATCATGGATATGCTCAATGATCATCTACTTGAACGTGTTATGCGTGGTGATGAGATTCCTAAATTTTCAAAAAAAT
GGCAGGAGGTGTTACAACATGCAATGGATCAGCAAATTATTTCGCAAGAAACATGTGAAACCTATCAAAAGCTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Latilactobacillus sakei subsp. sakei 23K |
44.28 |
85.22 |
0.377 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
41.053 |
89.623 |
0.368 |
| comGA | Streptococcus mutans UA140 |
38.796 |
94.025 |
0.365 |
| comGA | Streptococcus mutans UA159 |
38.796 |
94.025 |
0.365 |