Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   FGL89_RS02585 Genome accession   NZ_CP042374
Coordinates   548285..550879 (-) Length   864 a.a.
NCBI ID   WP_014973956.1    Uniprot ID   K0D978
Organism   Leuconostoc carnosum strain CBA3620     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 543285..555879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL89_RS02565 (FGL89_02565) murB 544162..545040 (-) 879 WP_014973960.1 UDP-N-acetylmuramate dehydrogenase -
  FGL89_RS02570 (FGL89_02570) ndk 545157..545570 (-) 414 WP_014973959.1 nucleoside-diphosphate kinase -
  FGL89_RS02575 (FGL89_02575) - 545624..546139 (-) 516 WP_014973958.1 DUF1456 family protein -
  FGL89_RS02580 (FGL89_02580) hexB 546206..548191 (-) 1986 WP_014973957.1 DNA mismatch repair endonuclease MutL Machinery gene
  FGL89_RS02585 (FGL89_02585) hexA 548285..550879 (-) 2595 WP_014973956.1 DNA mismatch repair protein MutS Machinery gene
  FGL89_RS02590 (FGL89_02590) recG/mmsA 550925..552955 (-) 2031 WP_135198074.1 ATP-dependent DNA helicase RecG Machinery gene
  FGL89_RS02595 (FGL89_02595) - 553411..553935 (+) 525 WP_014973954.1 NADPH-dependent FMN reductase -
  FGL89_RS08720 - 554048..554188 (+) 141 WP_019040553.1 hypothetical protein -
  FGL89_RS08725 - 554201..554479 (+) 279 WP_014973953.1 ImmA/IrrE family metallo-endopeptidase -
  FGL89_RS02605 (FGL89_02605) - 554544..555146 (+) 603 WP_014973952.1 DUF1643 domain-containing protein -
  FGL89_RS02610 (FGL89_02610) - 555232..555507 (+) 276 WP_014973951.1 hypothetical protein -
  FGL89_RS08605 - 555591..555749 (+) 159 WP_014973950.1 hypothetical protein -

Sequence


Protein


Download         Length: 864 a.a.        Molecular weight: 96575.84 Da        Isoelectric Point: 4.8491

>NTDB_id=331509 FGL89_RS02585 WP_014973956.1 548285..550879(-) (hexA) [Leuconostoc carnosum strain CBA3620]
MAKIVDTPMMVQYHEIKAQYPDAFVFYRLGDFYELFEDDAILGAKILELTLTARNKNSENPVPMAGIPHHAAQNYIDILV
DQGHKVAIVEQMEDPAVAKGMVKRDVVQLITPGTKMLGGAGADKENNYLAALRPNGNDLAMAYIDLSTGELKATTIGNFN
DVIDELSSLEVKEVVLRKDDELTIKHQVANQLGERGLVISWQSDVTANATVSFLTQPLTSIAETETTAMLLNYIFDTQRR
NLDHIVPATSYERLTYLKFNQDTRSNLDLIENTRTKKRAGSLLGLIDETKTAMGGRLLKQWLLKPLREQQEIEKRLDLVQ
AFQNDFFTRGALQDDLKSVYDLERLAARAAMGTMNARELVQLKKSLLAIPSIKTTLSATEGVLYDAGDKLDSMVDLAGLI
DEAIVDDPPVSVREGNIINDGFDEKIDTYRRVLTDNQKWLAQLETDERKVTGISSLKVGYNKNFGYFIEVTKANINKLEP
DRYERRQTLTNAERFVTPELKAHERLIIEAQAKRTEREYELFVTIRERLKANISRIQKLARLVARLDVLASLADVADNRR
FVRPTFTSHNMIAISQGRHPVVEALLGSGEFVANDVMLDEDNAMQLITGPNMAGKSTYMRELALIVILAQMGSFVPAEQA
ELPIFDQIFTRIGANDDIAMGQSTFMVEMAEANLALREATAHSLILFDELGRGTATYDGMALAQAIIEFLDAHIHAKTLF
STHYHELTALADRHDSITNVHVGAVEDDNGELHFLHQIQEGPADKSYGIHVAALAGLPRELINNATTILSHLESDDVVTD
HQLVQQSVTSEKHDESQQVELFNVDAVDSETEKVLEHLDKLDILNMTPVDAMNALNDLKKLRKK

Nucleotide


Download         Length: 2595 bp        

>NTDB_id=331509 FGL89_RS02585 WP_014973956.1 548285..550879(-) (hexA) [Leuconostoc carnosum strain CBA3620]
ATGGCCAAAATAGTAGACACACCAATGATGGTGCAATATCATGAAATTAAGGCACAATACCCTGATGCATTTGTTTTTTA
TCGTTTAGGTGATTTTTATGAACTTTTTGAAGATGATGCGATATTAGGGGCTAAAATACTTGAATTAACACTGACAGCAC
GTAATAAAAATTCAGAAAACCCCGTGCCAATGGCGGGTATACCGCATCATGCTGCGCAAAATTATATTGATATTTTAGTA
GATCAAGGTCATAAAGTTGCTATTGTTGAGCAAATGGAAGATCCTGCCGTTGCTAAGGGTATGGTGAAGCGAGATGTTGT
TCAGCTGATTACGCCAGGCACAAAAATGCTTGGCGGTGCGGGTGCTGATAAAGAAAACAACTATCTAGCTGCTCTTAGAC
CAAACGGTAATGATTTGGCAATGGCTTATATTGATCTATCTACAGGCGAATTAAAAGCAACAACTATCGGTAACTTTAAT
GATGTGATTGATGAATTAAGTTCGTTGGAAGTTAAAGAAGTTGTGTTACGTAAAGATGACGAGCTTACCATAAAACATCA
AGTTGCTAATCAACTTGGGGAACGTGGTCTAGTAATTTCTTGGCAGTCAGATGTGACAGCAAATGCAACAGTTAGTTTTT
TGACACAACCCTTAACAAGCATTGCTGAAACTGAAACGACAGCAATGTTACTTAATTATATTTTTGATACGCAGCGCCGT
AATTTGGATCACATTGTGCCTGCTACGAGTTATGAGCGACTAACTTATTTGAAATTTAACCAAGACACACGTTCTAATTT
AGACTTAATTGAAAATACGCGTACGAAAAAACGTGCAGGTTCACTGCTAGGATTAATTGATGAGACGAAGACAGCTATGG
GTGGTCGGCTACTGAAACAGTGGCTACTAAAACCATTACGTGAGCAACAGGAGATTGAAAAGCGACTTGACTTGGTACAG
GCGTTTCAAAATGATTTTTTTACACGTGGTGCTTTGCAAGATGATTTGAAATCAGTATATGATTTGGAACGATTAGCAGC
TCGTGCGGCTATGGGTACGATGAATGCACGAGAACTTGTGCAACTCAAAAAATCATTATTAGCTATTCCAAGCATTAAAA
CCACTTTATCAGCAACAGAAGGAGTACTTTACGATGCTGGTGACAAGCTTGATAGCATGGTTGATTTGGCAGGGTTGATA
GATGAAGCTATTGTTGATGACCCACCGGTGAGTGTCCGTGAAGGTAATATTATTAACGACGGATTCGATGAAAAGATAGA
TACATATCGCAGAGTTTTGACTGACAATCAAAAATGGCTAGCCCAATTAGAAACTGATGAGCGTAAAGTTACCGGTATTA
GTTCATTGAAAGTCGGGTATAATAAAAATTTTGGTTATTTTATTGAAGTGACTAAAGCTAACATTAATAAATTAGAACCA
GATCGTTATGAGCGACGACAGACACTTACAAATGCAGAACGCTTTGTCACGCCAGAATTAAAAGCGCATGAACGTTTGAT
TATTGAGGCACAAGCTAAACGAACAGAAAGAGAATATGAATTATTTGTAACGATTCGTGAACGACTAAAGGCAAATATTA
GTCGTATTCAAAAGCTGGCAAGGTTAGTTGCGCGCTTGGATGTTTTAGCTTCACTAGCTGATGTCGCTGACAATCGCCGT
TTCGTACGTCCTACCTTTACTAGTCATAACATGATAGCCATATCTCAAGGAAGACATCCTGTGGTAGAAGCATTGCTCGG
TTCAGGTGAGTTTGTGGCAAATGATGTGATGTTAGATGAAGACAATGCCATGCAACTGATTACTGGTCCTAATATGGCTG
GAAAATCAACTTATATGCGTGAATTAGCCTTAATTGTTATCTTGGCACAAATGGGCAGTTTTGTACCAGCAGAACAAGCT
GAATTACCTATTTTTGATCAAATATTTACGCGAATTGGTGCTAATGATGATATTGCTATGGGACAGTCAACTTTTATGGT
TGAAATGGCAGAAGCTAACCTAGCTTTGCGAGAAGCAACAGCACATTCGCTTATTTTATTTGACGAATTAGGGCGTGGTA
CGGCAACTTATGACGGTATGGCACTGGCGCAAGCAATTATCGAATTTTTAGATGCGCATATTCATGCCAAAACACTGTTT
TCAACACATTATCATGAATTAACTGCATTAGCTGACCGGCATGATAGCATTACCAACGTTCATGTTGGTGCAGTAGAAGA
TGATAACGGGGAATTGCATTTTCTACATCAAATTCAAGAAGGACCAGCTGATAAATCTTATGGTATTCATGTTGCGGCAC
TGGCTGGCTTGCCACGCGAACTCATTAACAATGCTACGACCATTCTTTCTCATTTAGAAAGTGATGATGTCGTTACTGAT
CACCAGCTTGTCCAACAATCAGTGACGTCAGAAAAACATGACGAATCACAACAAGTTGAATTGTTCAATGTTGATGCTGT
TGATTCAGAGACAGAAAAAGTATTAGAACACTTAGATAAATTAGATATTTTAAACATGACACCTGTAGATGCCATGAATG
CACTAAATGACTTAAAAAAGTTAAGAAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K0D978

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

47.368

98.958

0.469

  mutS Pseudomonas stutzeri strain ATCC 17587

38.844

100

0.389