Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | RIEAN_RS00990 | Genome accession | NC_014738 |
| Coordinates | 219915..220523 (+) | Length | 202 a.a. |
| NCBI ID | WP_004919077.1 | Uniprot ID | E4T8W1 |
| Organism | Riemerella anatipestifer ATCC 11845 = DSM 15868 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
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Genomic Context
Location: 214915..225523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIEAN_RS10450 (Riean_0200) | - | 215173..216930 (+) | 1758 | WP_013446731.1 | S8 family serine peptidase | - |
| RIEAN_RS10455 (Riean_0201) | - | 216930..219602 (+) | 2673 | WP_013446732.1 | PKD domain-containing protein | - |
| RIEAN_RS00990 (Riean_0202) | recR | 219915..220523 (+) | 609 | WP_004919077.1 | recombination mediator RecR | Machinery gene |
| RIEAN_RS00995 (Riean_0203) | - | 220530..221387 (+) | 858 | WP_013446733.1 | glycosyltransferase family 2 protein | - |
| RIEAN_RS01000 (Riean_0204) | secG | 221426..221788 (-) | 363 | WP_013446734.1 | preprotein translocase subunit SecG | - |
| RIEAN_RS01005 (Riean_0205) | - | 221930..223972 (-) | 2043 | WP_013446735.1 | pitrilysin family protein | - |
| RIEAN_RS01010 (Riean_0206) | - | 223985..225298 (-) | 1314 | WP_004919072.1 | pitrilysin family protein | - |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 22424.76 Da Isoelectric Point: 4.9891
>NTDB_id=33123 RIEAN_RS00990 WP_004919077.1 219915..220523(+) (recR) [Riemerella anatipestifer ATCC 11845 = DSM 15868]
MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKECHNFSDTDICEICADDSRHA
ELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKK
FKHFDIKFSNIARGISVGDELEYADEVSLGRSILNRIPYKGH
MNFPSKVLEKAVEEISGLPGIGRKSALRLALHLLRQPSSQGLALGDAIQNLVTEIKYCKECHNFSDTDICEICADDSRHA
ELLCVVEDVRDVMAIENTGKFKGKYLVLGGKISPMEGIGPQQLNIETLESKLEIGEIEEVIFALSATMEGDTTVYYLYKK
FKHFDIKFSNIARGISVGDELEYADEVSLGRSILNRIPYKGH
Nucleotide
Download Length: 609 bp
>NTDB_id=33123 RIEAN_RS00990 WP_004919077.1 219915..220523(+) (recR) [Riemerella anatipestifer ATCC 11845 = DSM 15868]
ATGAATTTTCCAAGTAAGGTTTTAGAAAAAGCAGTAGAAGAAATATCAGGTCTCCCAGGGATAGGCAGAAAGTCGGCTCT
CAGACTAGCGCTTCATTTGCTTAGACAACCGAGTTCACAAGGATTAGCTCTAGGCGATGCTATACAAAATCTAGTTACAG
AGATAAAATATTGTAAAGAATGCCATAACTTTTCGGACACAGATATTTGCGAAATTTGTGCAGATGACAGTAGACACGCT
GAACTCCTATGCGTTGTGGAAGATGTGAGAGATGTAATGGCGATAGAAAACACAGGAAAATTCAAAGGAAAATATTTGGT
TTTAGGAGGAAAAATATCGCCTATGGAAGGTATTGGACCTCAACAATTAAATATAGAAACTTTAGAAAGCAAACTAGAAA
TAGGGGAGATAGAGGAGGTTATTTTTGCACTATCTGCCACTATGGAGGGCGATACCACCGTGTATTATTTGTATAAAAAG
TTTAAGCATTTTGACATTAAATTCTCCAATATTGCGAGAGGGATTTCCGTAGGAGATGAACTAGAGTACGCCGATGAAGT
TTCTTTGGGGAGGTCTATTTTGAACCGAATACCTTATAAAGGTCATTAA
ATGAATTTTCCAAGTAAGGTTTTAGAAAAAGCAGTAGAAGAAATATCAGGTCTCCCAGGGATAGGCAGAAAGTCGGCTCT
CAGACTAGCGCTTCATTTGCTTAGACAACCGAGTTCACAAGGATTAGCTCTAGGCGATGCTATACAAAATCTAGTTACAG
AGATAAAATATTGTAAAGAATGCCATAACTTTTCGGACACAGATATTTGCGAAATTTGTGCAGATGACAGTAGACACGCT
GAACTCCTATGCGTTGTGGAAGATGTGAGAGATGTAATGGCGATAGAAAACACAGGAAAATTCAAAGGAAAATATTTGGT
TTTAGGAGGAAAAATATCGCCTATGGAAGGTATTGGACCTCAACAATTAAATATAGAAACTTTAGAAAGCAAACTAGAAA
TAGGGGAGATAGAGGAGGTTATTTTTGCACTATCTGCCACTATGGAGGGCGATACCACCGTGTATTATTTGTATAAAAAG
TTTAAGCATTTTGACATTAAATTCTCCAATATTGCGAGAGGGATTTCCGTAGGAGATGAACTAGAGTACGCCGATGAAGT
TTCTTTGGGGAGGTCTATTTTGAACCGAATACCTTATAAAGGTCATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
41.837 |
97.03 |
0.406 |
| recR | Streptococcus pneumoniae R6 |
40.306 |
97.03 |
0.391 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
39.286 |
97.03 |
0.381 |