Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BMEA_RS05275 | Genome accession | NC_012441 |
| Coordinates | 1095363..1095869 (-) | Length | 168 a.a. |
| NCBI ID | WP_002967690.1 | Uniprot ID | A0A7L9MC56 |
| Organism | Brucella melitensis ATCC 23457 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1090363..1100869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMEA_RS05260 (BMEA_A1145) | - | 1092431..1093060 (+) | 630 | WP_002967687.1 | MarC family protein | - |
| BMEA_RS05265 (BMEA_A1146) | phnN | 1093151..1093729 (-) | 579 | WP_004685664.1 | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | - |
| BMEA_RS05270 (BMEA_A1147) | phnF | 1093916..1094677 (+) | 762 | WP_004683825.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| BMEA_RS18160 | - | 1094820..1095207 (+) | 388 | Protein_1067 | hypothetical protein | - |
| BMEA_RS16620 | - | 1095259..1095459 (+) | 201 | WP_002971429.1 | hypothetical protein | - |
| BMEA_RS05275 (BMEA_A1148) | ssb | 1095363..1095869 (-) | 507 | WP_002967690.1 | single-stranded DNA-binding protein | Machinery gene |
| BMEA_RS16625 (BMEA_A1149) | - | 1096437..1096637 (+) | 201 | WP_002964232.1 | hypothetical protein | - |
| BMEA_RS05280 (BMEA_A1150) | uvrA | 1096768..1099692 (+) | 2925 | WP_004686427.1 | excinuclease ABC subunit UvrA | - |
| BMEA_RS05285 (BMEA_A1151) | - | 1099879..1100154 (-) | 276 | WP_002964234.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18371.15 Da Isoelectric Point: 5.3476
>NTDB_id=33119 BMEA_RS05275 WP_002967690.1 1095363..1095869(-) (ssb) [Brucella melitensis ATCC 23457]
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
Nucleotide
Download Length: 507 bp
>NTDB_id=33119 BMEA_RS05275 WP_002967690.1 1095363..1095869(-) (ssb) [Brucella melitensis ATCC 23457]
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.947 |
100 |
0.554 |
| ssb | Vibrio cholerae strain A1552 |
49.711 |
100 |
0.512 |
| ssb | Neisseria meningitidis MC58 |
38.547 |
100 |
0.411 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.405 |