Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | FKV26_RS03550 | Genome accession | NZ_CP042299 |
| Coordinates | 797398..798042 (+) | Length | 214 a.a. |
| NCBI ID | WP_001890391.1 | Uniprot ID | Q9KSP3 |
| Organism | Vibrio cholerae O1 strain AAS91 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 792398..803042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FKV26_RS03540 (FKV26_03625) | - | 792588..794687 (+) | 2100 | WP_001995155.1 | EAL domain-containing protein | - |
| FKV26_RS03545 (FKV26_03630) | - | 794659..797022 (-) | 2364 | WP_000687840.1 | DNA polymerase II | - |
| FKV26_RS03550 (FKV26_03635) | letA | 797398..798042 (+) | 645 | WP_001890391.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| FKV26_RS03555 (FKV26_03640) | uvrC | 798042..799874 (+) | 1833 | WP_000107095.1 | excinuclease ABC subunit UvrC | - |
| FKV26_RS03560 (FKV26_03645) | pgsA | 799922..800479 (+) | 558 | WP_001211977.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| FKV26_RS03585 (FKV26_03670) | - | 801372..802490 (+) | 1119 | WP_001190450.1 | GGDEF domain-containing protein | - |
| FKV26_RS03590 (FKV26_03675) | - | 802487..802972 (-) | 486 | WP_001261948.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23751.50 Da Isoelectric Point: 6.4970
>NTDB_id=331014 FKV26_RS03550 WP_001890391.1 797398..798042(+) (letA) [Vibrio cholerae O1 strain AAS91]
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
Nucleotide
Download Length: 645 bp
>NTDB_id=331014 FKV26_RS03550 WP_001890391.1 797398..798042(+) (letA) [Vibrio cholerae O1 strain AAS91]
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGTATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
51.905 |
98.131 |
0.509 |
| letA | Legionella pneumophila strain ERS1305867 |
51.905 |
98.131 |
0.509 |