Detailed information NTG0330776

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: FQ758_RS00970
• Genome accession: NZ_CP042269
• Coordinates: 21221..22246 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain HOU1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16221..27246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FQ758_RS00945 (FQ758_00945)	-	16410..16727 (-)	318	WP_079387145.1	tetratricopeptide repeat protein	-
FQ758_RS00950 (FQ758_00950)	trkA	16875..18248 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
FQ758_RS00955 (FQ758_00955)	rsmB	18276..19580 (-)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
FQ758_RS00960 (FQ758_00960)	fmt	19577..20521 (-)	945	WP_003131369.1	methionyl-tRNA formyltransferase	-
FQ758_RS00965 (FQ758_00965)	def	20576..21082 (-)	507	WP_003107059.1	peptide deformylase	-
FQ758_RS00970 (FQ758_00970)	tsaP	21221..22246 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
FQ758_RS00975 (FQ758_00975)	dprA	22381..23469 (+)	1089	WP_033951625.1	DNA-processing protein DprA	Machinery gene
FQ758_RS00980 (FQ758_00980)	-	23510..24067 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
FQ758_RS00985 (FQ758_00985)	-	24077..25054 (-)	978	WP_003111202.1	NADPH:quinone reductase	-
FQ758_RS00990 (FQ758_00990)	hemF	25245..26162 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
FQ758_RS00995 (FQ758_00995)	aroE	26220..27044 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=330776 FQ758_RS00970 WP_003097294.1 21221..22246(+) (tsaP) [Pseudomonas aeruginosa strain HOU1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=330776 FQ758_RS00970 WP_003097294.1 21221..22246(+) (tsaP) [Pseudomonas aeruginosa strain HOU1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAGGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393