Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EBA29_RS01840 Genome accession   NZ_CP034203
Coordinates   378952..379905 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain 83     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 373952..384905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EBA29_RS01815 (EBA29_00373) - 373995..375422 (+) 1428 WP_100261600.1 HAMP domain-containing sensor histidine kinase -
  EBA29_RS01820 (EBA29_00375) rapC 375581..376729 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  EBA29_RS01825 (EBA29_00376) phrC 376713..376832 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  EBA29_RS01830 - 376984..377079 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  EBA29_RS01835 (EBA29_00377) - 377174..378538 (-) 1365 WP_072177353.1 aspartate kinase -
  EBA29_RS01840 (EBA29_00379) ceuB 378952..379905 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  EBA29_RS01845 (EBA29_00380) - 379895..380842 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  EBA29_RS01850 (EBA29_00381) - 380836..381594 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  EBA29_RS01855 (EBA29_00382) - 381616..382560 (+) 945 WP_012116805.1 siderophore ABC transporter substrate-binding protein -
  EBA29_RS01860 (EBA29_00383) - 382602..384026 (-) 1425 WP_103527148.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=329771 EBA29_RS01840 WP_015239156.1 378952..379905(+) (ceuB) [Bacillus velezensis strain 83]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=329771 EBA29_RS01840 WP_015239156.1 378952..379905(+) (ceuB) [Bacillus velezensis strain 83]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAATTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment