Detailed information NTG0329670

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FP510_RS10480
• Genome accession: NZ_CP042000
• Coordinates: 2077609..2078718 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain GBS19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2072609..2083718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FP510_RS10455 (FP510_10875)	-	2072981..2073820 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
FP510_RS10460 (FP510_10880)	pgsA	2073820..2074362 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FP510_RS10465 (FP510_10885)	yfmH	2074485..2075768 (-)	1284	WP_000217762.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FP510_RS10470 (FP510_10890)	yfmF	2075770..2077014 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FP510_RS10475 (FP510_10895)	yaaA	2077253..2077606 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
FP510_RS10480 (FP510_10900)	recF	2077609..2078718 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
FP510_RS10485 (FP510_10905)	-	2078730..2079596 (-)	867	WP_000398683.1	GRP family sugar transporter	-
FP510_RS10490 (FP510_10910)	-	2079652..2080314 (-)	663	WP_001868421.1	helix-turn-helix transcriptional regulator	-
FP510_RS10495 (FP510_10915)	guaB	2080389..2081870 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
FP510_RS10500 (FP510_10920)	-	2082027..2082512 (-)	486	WP_001034427.1	arginine repressor	-
FP510_RS10505 (FP510_10925)	-	2082522..2083202 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=329670 FP510_RS10480 WP_000264870.1 2077609..2078718(+) (recF) [Streptococcus agalactiae strain GBS19]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=329670 FP510_RS10480 WP_000264870.1 2077609..2078718(+) (recF) [Streptococcus agalactiae strain GBS19]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447