Detailed information NTG0329563

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FP509_RS10780
• Genome accession: NZ_CP041999
• Coordinates: 2118043..2119152 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain GBS11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2113043..2124152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FP509_RS10755 (FP509_11155)	-	2113409..2114248 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
FP509_RS10760 (FP509_11160)	pgsA	2114248..2114790 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
FP509_RS10765 (FP509_11165)	yfmH	2114913..2116196 (-)	1284	WP_000217762.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
FP509_RS10770 (FP509_11170)	yfmF	2116198..2117442 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
FP509_RS10775 (FP509_11175)	yaaA	2117681..2118040 (+)	360	WP_185169050.1	S4 domain-containing protein YaaA	-
FP509_RS10780 (FP509_11180)	recF	2118043..2119152 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
FP509_RS10785 (FP509_11185)	-	2119164..2120030 (-)	867	WP_000398683.1	GRP family sugar transporter	-
FP509_RS10790 (FP509_11190)	-	2120086..2120748 (-)	663	WP_001868421.1	helix-turn-helix transcriptional regulator	-
FP509_RS10795 (FP509_11195)	guaB	2120823..2122304 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
FP509_RS10800 (FP509_11200)	-	2122461..2122946 (-)	486	WP_001034427.1	arginine repressor	-
FP509_RS10805 (FP509_11205)	-	2122956..2123636 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=329563 FP509_RS10780 WP_000264870.1 2118043..2119152(+) (recF) [Streptococcus agalactiae strain GBS11]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=329563 FP509_RS10780 WP_000264870.1 2118043..2119152(+) (recF) [Streptococcus agalactiae strain GBS11]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447