Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   EH197_RS15730 Genome accession   NZ_CP034169
Coordinates   3089429..3090472 (-) Length   347 a.a.
NCBI ID   WP_167494437.1    Uniprot ID   -
Organism   Enterococcus avium strain 352     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 3084429..3095472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EH197_RS15715 (EH197_15720) - 3086653..3087144 (-) 492 WP_016180299.1 ComE operon protein 2 -
  EH197_RS15720 (EH197_15725) - 3087172..3087777 (-) 606 WP_137439935.1 helix-hairpin-helix domain-containing protein -
  EH197_RS15725 (EH197_15730) - 3087985..3089325 (+) 1341 WP_137439936.1 ISL3 family transposase -
  EH197_RS15730 (EH197_15735) sepM 3089429..3090472 (-) 1044 WP_167494437.1 SepM family pheromone-processing serine protease Regulator
  EH197_RS15735 (EH197_15740) coaD 3090462..3090956 (-) 495 WP_016180302.1 pantetheine-phosphate adenylyltransferase -
  EH197_RS15740 (EH197_15745) rsmD 3090958..3091512 (-) 555 WP_102871205.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EH197_RS15745 (EH197_15750) - 3091636..3091983 (-) 348 WP_164872461.1 YlbG family protein -
  EH197_RS15750 (EH197_15755) - 3091970..3092395 (-) 426 WP_137439937.1 YlbF family regulator -
  EH197_RS15755 (EH197_15760) - 3092397..3093503 (-) 1107 WP_137439938.1 CAP-associated domain-containing protein -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 38208.90 Da        Isoelectric Point: 6.8884

>NTDB_id=329534 EH197_RS15730 WP_167494437.1 3089429..3090472(-) (sepM) [Enterococcus avium strain 352]
MKNNKLVKRLALIFLALVVVACVIVPIPYYIEEPGETIDLKELITVNDKKDEDKGSFSLTSVGIRRATVFTAIKSKIEPF
HEIISADELTGGASDDEYMQIQKFNMETSQNFAIEQALKLANKPYEMKYKGVYVLGVEKNSNFSGKISVGDTVTKADGKT
FTSSEDFMKYVKSQKVGQKMKVTYTHDGETKEATEKLIKLPTDKKPGIGITLTDHTEIDSQEKVKVDAGDIGGPSAGLMF
TLEIYEQLVDKDLRHGKKIAGTGTINSEGEVGRIGGIDKKVASAAASNNKVFFAPDDEITKEMKKAQPGIKSNYEEAKAA
AKELKTDMKIVPVKTVQDALDYLEKMK

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=329534 EH197_RS15730 WP_167494437.1 3089429..3090472(-) (sepM) [Enterococcus avium strain 352]
GTGAAAAATAATAAACTTGTCAAACGATTAGCCCTTATTTTCTTAGCCTTAGTAGTAGTAGCATGTGTGATTGTACCGAT
ACCTTACTACATCGAAGAGCCTGGAGAGACAATCGACCTGAAAGAATTGATTACTGTTAATGATAAAAAAGATGAAGATA
AGGGTTCCTTCAGTTTAACTTCTGTCGGAATTCGTCGAGCCACCGTTTTTACTGCGATCAAATCAAAGATCGAACCATTC
CATGAGATTATTTCTGCGGATGAACTGACTGGCGGAGCCAGCGATGATGAATATATGCAGATTCAAAAATTTAATATGGA
AACCTCTCAAAACTTTGCCATTGAGCAGGCGCTAAAACTGGCAAACAAGCCTTACGAGATGAAGTATAAAGGGGTTTATG
TGCTGGGTGTTGAAAAGAACTCAAACTTTTCTGGAAAGATCAGTGTGGGAGACACGGTCACGAAGGCCGATGGGAAAACC
TTTACCAGCAGCGAAGATTTTATGAAATATGTAAAATCGCAAAAAGTTGGTCAGAAAATGAAGGTGACCTACACACATGA
TGGGGAAACAAAGGAAGCTACAGAAAAATTGATTAAGCTTCCCACCGATAAAAAACCGGGAATTGGCATTACATTGACTG
ACCACACAGAGATCGATTCGCAGGAGAAAGTGAAAGTTGATGCCGGAGACATTGGCGGCCCTTCAGCTGGCTTAATGTTT
ACATTGGAAATCTATGAACAACTCGTTGATAAGGATTTACGTCATGGGAAGAAGATCGCTGGAACCGGAACGATCAATTC
AGAGGGAGAAGTTGGCAGAATCGGTGGCATCGATAAGAAAGTTGCCAGTGCCGCTGCCAGCAATAATAAGGTATTTTTTG
CACCAGATGATGAGATTACCAAAGAGATGAAAAAAGCGCAGCCTGGCATCAAGTCAAATTATGAAGAAGCCAAAGCGGCC
GCTAAAGAATTAAAGACCGATATGAAGATTGTACCGGTCAAAACGGTACAGGATGCGTTAGACTATTTAGAAAAAATGAA
ATAA

Domains

Predicted by InterproScan.

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(154-306)

PDZ domain (PDZ_2)

(129-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

49.422

99.712

0.493

Multiple sequence alignment