Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | BAMF_RS27890 | Genome accession | NC_014551 |
| Coordinates | 1451729..1453825 (-) | Length | 698 a.a. |
| NCBI ID | WP_013352040.1 | Uniprot ID | A0A9P1JGN0 |
| Organism | Bacillus amyloliquefaciens DSM 7 = ATCC 23350 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1446729..1458825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMF_RS27865 (BAMF_1444) | - | 1447305..1447565 (+) | 261 | WP_013352035.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| BAMF_RS27870 (BAMF_1445) | - | 1447774..1449273 (-) | 1500 | WP_013352036.1 | ATP-binding protein | - |
| BAMF_RS27875 (BAMF_1446) | - | 1449491..1449937 (+) | 447 | WP_013352037.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BAMF_RS27880 (BAMF_1447) | motB | 1449973..1450776 (-) | 804 | WP_013352038.1 | flagellar motor protein MotB | - |
| BAMF_RS27885 (BAMF_1448) | motA | 1450748..1451563 (-) | 816 | WP_013352039.1 | flagellar motor stator protein MotA | - |
| BAMF_RS27890 (BAMF_1449) | clpE | 1451729..1453825 (-) | 2097 | WP_013352040.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| BAMF_RS27895 (BAMF_1450) | - | 1454223..1455260 (+) | 1038 | WP_013352041.1 | membrane protein | - |
| BAMF_RS27900 (BAMF_1451) | - | 1455359..1456481 (+) | 1123 | Protein_1491 | hypothetical protein | - |
| BAMF_RS27905 (BAMF_1452) | queC | 1456733..1457392 (+) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| BAMF_RS27910 (BAMF_1453) | queD | 1457453..1457833 (+) | 381 | WP_232469734.1 | 6-carboxytetrahydropterin synthase QueD | - |
| BAMF_RS27915 (BAMF_1454) | queE | 1457826..1458557 (+) | 732 | WP_013352044.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 78004.15 Da Isoelectric Point: 5.2483
>NTDB_id=32948 BAMF_RS27890 WP_013352040.1 1451729..1453825(-) (clpE) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=32948 BAMF_RS27890 WP_013352040.1 1451729..1453825(-) (clpE) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
57.319 |
100 |
0.6 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.369 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.995 |
100 |
0.589 |
| clpE | Streptococcus pneumoniae D39 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae Rx1 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae R6 |
55.586 |
100 |
0.585 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.56 |
91.117 |
0.497 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.544 |
90.401 |
0.43 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae Rx1 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae D39 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
45.455 |
88.252 |
0.401 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.114 |
87.966 |
0.397 |
| clpC | Streptococcus mutans UA159 |
45.114 |
87.966 |
0.397 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
41.749 |
86.819 |
0.362 |