Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | FP509_RS01445 | Genome accession | NZ_CP041999 |
| Coordinates | 232135..232404 (+) | Length | 89 a.a. |
| NCBI ID | WP_000962019.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain GBS11 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 227135..237404
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FP509_RS01400 (FP509_01395) | - | 227264..227590 (+) | 327 | WP_000404431.1 | DUF1366 domain-containing protein | - |
| FP509_RS01405 (FP509_01400) | - | 227565..227777 (+) | 213 | WP_000698337.1 | hypothetical protein | - |
| FP509_RS01410 (FP509_01405) | - | 227790..228092 (+) | 303 | WP_000215499.1 | hypothetical protein | - |
| FP509_RS01415 (FP509_01410) | - | 228094..228348 (+) | 255 | WP_000611524.1 | phage holin | - |
| FP509_RS01420 (FP509_01415) | - | 228474..229805 (+) | 1332 | WP_000257237.1 | GH25 family lysozyme | - |
| FP509_RS01425 (FP509_01420) | - | 229940..230836 (+) | 897 | WP_001061853.1 | sensor histidine kinase | - |
| FP509_RS01430 (FP509_01425) | - | 230830..231129 (+) | 300 | WP_000258211.1 | STAS-like domain-containing protein | - |
| FP509_RS01435 (FP509_01430) | - | 231239..231439 (+) | 201 | WP_000076712.1 | CsbD family protein | - |
| FP509_RS01440 (FP509_01435) | - | 231480..231650 (-) | 171 | WP_000356856.1 | hypothetical protein | - |
| FP509_RS10940 | - | 231786..231911 (-) | 126 | WP_017285425.1 | hypothetical protein | - |
| FP509_RS01445 (FP509_01440) | comGC | 232135..232404 (+) | 270 | WP_000962019.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FP509_RS01450 (FP509_01445) | comGD | 232379..232792 (+) | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FP509_RS01455 (FP509_01450) | comGE | 232764..233063 (+) | 300 | WP_000234804.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| FP509_RS01460 (FP509_01455) | comGF | 233017..233478 (+) | 462 | WP_001878820.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FP509_RS01465 (FP509_01460) | comGG | 233456..233827 (+) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| FP509_RS01470 (FP509_01465) | comGH | 233942..234916 (+) | 975 | WP_001008574.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FP509_RS01475 (FP509_01470) | - | 234948..236141 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| FP509_RS01480 (FP509_01475) | - | 236293..236499 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| FP509_RS01485 (FP509_01480) | - | 236558..236695 (+) | 138 | WP_001865900.1 | hypothetical protein | - |
| FP509_RS01490 (FP509_01485) | - | 236736..237191 (+) | 456 | WP_000905673.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 89 a.a. Molecular weight: 9783.29 Da Isoelectric Point: 9.4004
>NTDB_id=329472 FP509_RS01445 WP_000962019.1 232135..232404(+) (comGC) [Streptococcus agalactiae strain GBS11]
MLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLKSGGYITEKQEKAYLDYYKDS
SNGSQKISS
MLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKASLSTLKSGGYITEKQEKAYLDYYKDS
SNGSQKISS
Nucleotide
Download Length: 270 bp
>NTDB_id=329472 FP509_RS01445 WP_000962019.1 232135..232404(+) (comGC) [Streptococcus agalactiae strain GBS11]
ATGTTAGTTGTTTTGATCATTATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCAC
AAGAACTGGAAATGCCGCTGTTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAG
CTAGTTTATCCACTCTAAAATCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGT
TCCAATGGTTCTCAGAAAATTTCAAGTTAA
ATGTTAGTTGTTTTGATCATTATTTCGGTCTTGTTGTTATTGTTTGTACCCAATTTATCAAAACAAAAGGAAAGTGTCAC
AAGAACTGGAAATGCCGCTGTTGTCAAGGTTGTAGAAAGTCAAGCCGAACTTTTTGAACTGCAAGAAACAGGTAGAAAAG
CTAGTTTATCCACTCTAAAATCTGGAGGATATATTACTGAAAAGCAAGAAAAAGCCTATTTAGATTATTATAAAGACAGT
TCCAATGGTTCTCAGAAAATTTCAAGTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Streptococcus gordonii str. Challis substr. CH1 |
60.674 |
100 |
0.607 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
58.427 |
100 |
0.584 |
| comGC/cglC | Streptococcus pneumoniae D39 |
58.427 |
100 |
0.584 |
| comGC/cglC | Streptococcus pneumoniae R6 |
58.427 |
100 |
0.584 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
58.427 |
100 |
0.584 |
| comGC | Streptococcus suis isolate S10 |
64.384 |
82.022 |
0.528 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
56 |
84.27 |
0.472 |
| comGC/cglC | Streptococcus mitis SK321 |
54.667 |
84.27 |
0.461 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
59.42 |
77.528 |
0.461 |
| comGC | Streptococcus mutans UA140 |
49.315 |
82.022 |
0.404 |
| comGC | Streptococcus mutans UA159 |
49.315 |
82.022 |
0.404 |