Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | EAL91_RS01790 | Genome accession | NZ_CP034147 |
| Coordinates | 361217..361792 (-) | Length | 191 a.a. |
| NCBI ID | WP_121053967.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain HP14039 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 356217..366792
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAL91_RS01780 | - | 357919..359151 (-) | 1233 | WP_164997386.1 | restriction endonuclease subunit S | - |
| EAL91_RS01785 | - | 359148..361184 (-) | 2037 | WP_121053966.1 | N-6 DNA methylase | - |
| EAL91_RS01790 | comFC | 361217..361792 (-) | 576 | WP_121053967.1 | ComF family protein | Machinery gene |
| EAL91_RS01795 | tmk | 361780..362355 (-) | 576 | WP_121053968.1 | dTMP kinase | - |
| EAL91_RS01800 | coaD | 362357..362830 (-) | 474 | WP_024118156.1 | pantetheine-phosphate adenylyltransferase | - |
| EAL91_RS01805 | - | 362830..363393 (-) | 564 | WP_121053969.1 | UbiX family flavin prenyltransferase | - |
| EAL91_RS01810 | flgA | 363403..364059 (-) | 657 | WP_121053970.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| EAL91_RS01815 | uvrD | 364056..366101 (-) | 2046 | WP_207208536.1 | DNA helicase UvrD | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21350.91 Da Isoelectric Point: 8.6728
>NTDB_id=329349 EAL91_RS01790 WP_121053967.1 361217..361792(-) (comFC) [Helicobacter pylori strain HP14039]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNIPLYGIAIDDKIKSFYSHAAVLLKGFCQGNLKPTYGTLRATNTVSYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNIPLYGIAIDDKIKSFYSHAAVLLKGFCQGNLKPTYGTLRATNTVSYAGKSLEFRTNNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=329349 EAL91_RS01790 WP_121053967.1 361217..361792(-) (comFC) [Helicobacter pylori strain HP14039]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTAAACGATCTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATGCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGACTTTAAGGGCGACTAACACTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACTAACAACCCACGAAATTTCACTTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCTCTTTGCCCAAATTGCTTAAACGATCTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATATCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATGCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGACTTTAAGGGCGACTAACACTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCACTAACAACCCACGAAATTTCACTTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
35.938 |
100 |
0.361 |