Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | BAMF_RS20360 | Genome accession | NC_014551 |
| Coordinates | 30093..30689 (+) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens DSM 7 = ATCC 23350 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 25093..35689
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMF_RS20340 (BAMF_0018) | - | 26440..26991 (-) | 552 | WP_013350736.1 | isochorismatase family cysteine hydrolase | - |
| BAMF_RS20345 (BAMF_0019) | tadA | 27074..27556 (+) | 483 | WP_013350737.1 | tRNA adenosine(34) deaminase TadA | - |
| BAMF_RS20350 (BAMF_0020) | dnaX | 28039..29730 (+) | 1692 | WP_013350738.1 | DNA polymerase III subunit gamma/tau | - |
| BAMF_RS20355 (BAMF_0021) | - | 29755..30078 (+) | 324 | WP_003150700.1 | YbaB/EbfC family nucleoid-associated protein | - |
| BAMF_RS20360 (BAMF_0022) | recR | 30093..30689 (+) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| BAMF_RS20365 (BAMF_0023) | - | 30708..30932 (+) | 225 | WP_013350739.1 | YaaL family protein | - |
| BAMF_RS20370 (BAMF_0024) | - | 30993..31256 (+) | 264 | WP_013350740.1 | pro-sigmaK processing inhibitor BofA family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=32899 BAMF_RS20360 WP_003150697.1 30093..30689(+) (recR) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=32899 BAMF_RS20360 WP_003150697.1 30093..30689(+) (recR) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGCGAGGATACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAAGATGTTATTGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTGCT
TCACGGCGCGATTTCTCCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAACTGCTGAAGCGCCTTCAGGATG
ACCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCGAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGCCTGCCCGTCGGCGGCGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCGCTTGAAGGAAGACGTGAATTGTAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCGATTTGCGGACATATTACAGATCAGGACCCTTGTTATATATGCGAGGATACAAGAAGAGATAAGTCT
GTTATTTGTGTCGTGCAGGACCCTAAAGATGTTATTGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTGCT
TCACGGCGCGATTTCTCCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAACTGCTGAAGCGCCTTCAGGATG
ACCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCGAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGCCTGCCCGTCGGCGGCGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCGCTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |