Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | EHF38_RS01640 | Genome accession | NZ_CP034092 |
| Coordinates | 344058..344618 (+) | Length | 186 a.a. |
| NCBI ID | WP_002194578.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A52 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 339058..349618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EHF38_RS01615 (EHF38_01615) | - | 341199..341329 (-) | 131 | Protein_306 | hypothetical protein | - |
| EHF38_RS01620 (EHF38_01620) | rpoZ | 341368..341646 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| EHF38_RS01625 (EHF38_01625) | gmk | 341719..342348 (-) | 630 | WP_000015936.1 | guanylate kinase | - |
| EHF38_RS01630 (EHF38_01630) | ispH | 342471..343421 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| EHF38_RS01635 (EHF38_01635) | fimU | 343591..344064 (+) | 474 | WP_001214068.1 | GspH/FimT family pseudopilin | Machinery gene |
| EHF38_RS01640 (EHF38_01640) | pilV | 344058..344618 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| EHF38_RS01645 (EHF38_01645) | pilW | 344619..345620 (+) | 1002 | WP_000079199.1 | PilW family protein | Machinery gene |
| EHF38_RS01650 (EHF38_01650) | pilX | 345617..346435 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20162.12 Da Isoelectric Point: 8.2247
>NTDB_id=328871 EHF38_RS01640 WP_002194578.1 344058..344618(+) (pilV) [Acinetobacter baumannii strain A52]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=328871 EHF38_RS01640 WP_002194578.1 344058..344618(+) (pilV) [Acinetobacter baumannii strain A52]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilV | Acinetobacter baylyi ADP1 |
41.398 |
100 |
0.414 |