Detailed information NTG0328511

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EG219_RS01830
• Genome accession: NZ_CP034037
• Coordinates: 362843..363991 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BCSo1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 357843..368991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EG219_RS01810 (EG219_01810)	-	358264..358947 (-)	684	WP_007410265.1	ABC transporter ATP-binding protein	-
EG219_RS01815 (EG219_01815)	-	358962..360374 (-)	1413	WP_007410266.1	ABC transporter permease	-
EG219_RS01820 (EG219_01820)	-	360587..361270 (+)	684	WP_007410267.1	response regulator transcription factor	-
EG219_RS01825 (EG219_01825)	-	361257..362690 (+)	1434	WP_020953885.1	ATP-binding protein	-
EG219_RS01830 (EG219_01830)	rapC	362843..363991 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
EG219_RS01835 (EG219_01835)	phrC	363975..364094 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
EG219_RS01840 (EG219_01840)	-	364242..364337 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
EG219_RS01845 (EG219_01845)	-	364432..365796 (-)	1365	WP_007410272.1	aspartate kinase	-
EG219_RS01850 (EG219_01850)	ceuB	366210..367163 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
EG219_RS01855 (EG219_01855)	-	367153..368100 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
EG219_RS01860 (EG219_01860)	-	368094..368852 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=328511 EG219_RS01830 WP_007410270.1 362843..363991(+) (rapC) [Bacillus velezensis strain BCSo1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=328511 EG219_RS01830 WP_007410270.1 362843..363991(+) (rapC) [Bacillus velezensis strain BCSo1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568