Detailed information NTG0328314

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: FO444_RS06415
• Genome accession: NZ_CP041759
• Coordinates: 1253759..1254829 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis subsp. lactis strain IMAU11823
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1248759..1259829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FO444_RS06400 (FO444_06415)	dprA	1249057..1249905 (+)	849	WP_012897825.1	DNA-processing protein DprA	Machinery gene
FO444_RS06405 (FO444_06420)	topA	1250167..1252299 (+)	2133	WP_033899618.1	type I DNA topoisomerase	-
FO444_RS06410 (FO444_06425)	trmFO	1252371..1253714 (+)	1344	WP_017864499.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
FO444_RS06415 (FO444_06430)	xerS	1253759..1254829 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
FO444_RS06420 (FO444_06435)	-	1255314..1255601 (-)	288	WP_017864500.1	hypothetical protein	-
FO444_RS06425 (FO444_06440)	xerS	1255685..1256740 (-)	1056	WP_017864501.1	tyrosine recombinase XerS	Machinery gene
FO444_RS06430 (FO444_06445)	-	1257437..1257946 (+)	510	WP_017864502.1	hypothetical protein	-
FO444_RS06435 (FO444_06450)	-	1258061..1258408 (-)	348	WP_017864503.1	helix-turn-helix transcriptional regulator	-
FO444_RS06440 (FO444_06455)	-	1258726..1258923 (+)	198	WP_017864504.1	hypothetical protein	-
FO444_RS06445 (FO444_06460)	-	1259011..1259283 (-)	273	WP_306471740.1	hypothetical protein	-
FO444_RS06450 (FO444_06465)	-	1259393..1259812 (-)	420	WP_098403360.1	hypothetical protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=328314 FO444_RS06415 WP_003131037.1 1253759..1254829(-) (xerS) [Lactococcus lactis subsp. lactis strain IMAU11823]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=328314 FO444_RS06415 WP_003131037.1 1253759..1254829(-) (xerS) [Lactococcus lactis subsp. lactis strain IMAU11823]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767