Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EGH20_RS12530 | Genome accession | NZ_CP034026 |
| Coordinates | 2114899..2115312 (-) | Length | 137 a.a. |
| NCBI ID | WP_165865034.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FQ20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2109899..2120312
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGH20_RS12495 (EGH20_12495) | pilA | 2110888..2112141 (+) | 1254 | WP_003687004.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| EGH20_RS12505 (EGH20_12505) | - | 2112435..2113132 (-) | 698 | Protein_2130 | opacity family porin | - |
| EGH20_RS14570 | - | 2113114..2113239 (-) | 126 | WP_276310601.1 | hypothetical protein | - |
| EGH20_RS12510 (EGH20_12510) | - | 2113657..2114050 (-) | 394 | Protein_2132 | pilin | - |
| EGH20_RS12515 (EGH20_12515) | - | 2114421..2114564 (-) | 144 | WP_010361012.1 | hypothetical protein | - |
| EGH20_RS14405 (EGH20_12525) | - | 2114669..2114776 (-) | 108 | Protein_2134 | pilin | - |
| EGH20_RS12530 (EGH20_12530) | pilE | 2114899..2115312 (-) | 414 | WP_165865034.1 | pilin | Machinery gene |
| EGH20_RS12540 (EGH20_12540) | lpxC | 2115418..2116341 (-) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| EGH20_RS12545 (EGH20_12545) | - | 2116843..2117229 (-) | 387 | Protein_2137 | pilin | - |
| EGH20_RS12555 (EGH20_12555) | - | 2117497..2117880 (-) | 384 | Protein_2138 | pilin | - |
| EGH20_RS12565 (EGH20_12565) | pilE | 2118148..2118570 (-) | 423 | WP_165865035.1 | pilin | Machinery gene |
| EGH20_RS12570 (EGH20_12570) | - | 2118709..2119068 (-) | 360 | Protein_2140 | pilin | - |
| EGH20_RS12575 (EGH20_12575) | pilE | 2119146..2119559 (-) | 414 | WP_017146667.1 | pilin | Machinery gene |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14900.64 Da Isoelectric Point: 7.8483
>NTDB_id=328311 EGH20_RS12530 WP_165865034.1 2114899..2115312(-) (pilE) [Neisseria gonorrhoeae strain FQ20]
MPTDPDSRLRGNDEAILLVEGQKSAVTEYYLNHGKWPENNDSAGVASSSSIKGKYVKEVEVAKGVVTATMKSDGVNKEIK
GKKLSLWARRQDGSVKWFCGQPVTRTDDAKDDVTAATTGKIETKHLPSTCRDESNAT
MPTDPDSRLRGNDEAILLVEGQKSAVTEYYLNHGKWPENNDSAGVASSSSIKGKYVKEVEVAKGVVTATMKSDGVNKEIK
GKKLSLWARRQDGSVKWFCGQPVTRTDDAKDDVTAATTGKIETKHLPSTCRDESNAT
Nucleotide
Download Length: 414 bp
>NTDB_id=328311 EGH20_RS12530 WP_165865034.1 2114899..2115312(-) (pilE) [Neisseria gonorrhoeae strain FQ20]
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGTCGAAGGTCAAAAATCAGCCGTTAC
CGAATATTACCTGAATCACGGCAAATGGCCGGAAAACAACGACTCTGCCGGCGTGGCATCTTCTTCATCAATCAAAGGCA
AATATGTTAAGGAAGTTGAAGTCGCAAAAGGCGTCGTTACCGCCACAATGAAATCAGACGGCGTAAACAAAGAAATCAAA
GGCAAAAAACTCTCCCTGTGGGCCAGGCGTCAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCACCGA
CGACGCCAAAGACGACGTTACCGCCGCCACCACCGGCAAAATCGAAACCAAGCACCTGCCGTCAACCTGCCGCGATGAAT
CAAATGCCACCTAA
GTGCCGACAGACCCGGATTCCCGCCTGCGCGGGAATGACGAAGCCATCCTTTTGGTCGAAGGTCAAAAATCAGCCGTTAC
CGAATATTACCTGAATCACGGCAAATGGCCGGAAAACAACGACTCTGCCGGCGTGGCATCTTCTTCATCAATCAAAGGCA
AATATGTTAAGGAAGTTGAAGTCGCAAAAGGCGTCGTTACCGCCACAATGAAATCAGACGGCGTAAACAAAGAAATCAAA
GGCAAAAAACTCTCCCTGTGGGCCAGGCGTCAAGACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCACCGA
CGACGCCAAAGACGACGTTACCGCCGCCACCACCGGCAAAATCGAAACCAAGCACCTGCCGTCAACCTGCCGCGATGAAT
CAAATGCCACCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
72.464 |
100 |
0.73 |
| pilE | Neisseria gonorrhoeae MS11 |
72.464 |
100 |
0.73 |