Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   EGH13_RS09195 Genome accession   NZ_CP034022
Coordinates   1570850..1571494 (-) Length   214 a.a.
NCBI ID   WP_047918176.1    Uniprot ID   -
Organism   Neisseria gonorrhoeae strain FQ36     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1565850..1576494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGH13_RS09160 (EGH13_09160) ftsL 1566331..1566594 (-) 264 WP_003701583.1 cell division protein FtsL -
  EGH13_RS09165 (EGH13_09165) rsmH 1566621..1567577 (-) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EGH13_RS09170 (EGH13_09170) mraZ 1567574..1568029 (-) 456 WP_003689463.1 division/cell wall cluster transcriptional repressor MraZ -
  EGH13_RS09175 (EGH13_09175) - 1568308..1569555 (+) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  EGH13_RS09190 (EGH13_09190) - 1569996..1570817 (-) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  EGH13_RS09195 (EGH13_09195) dsbA1 1570850..1571494 (-) 645 WP_047918176.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  EGH13_RS09200 (EGH13_09200) ftsN 1571497..1572360 (-) 864 WP_171010418.1 cell division protein FtsN -
  EGH13_RS09205 (EGH13_09205) comM 1572466..1573962 (-) 1497 WP_012503875.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  EGH13_RS09210 (EGH13_09210) - 1573976..1574296 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  EGH13_RS09220 (EGH13_09220) putP 1574782..1576308 (+) 1527 WP_003689473.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24031.13 Da        Isoelectric Point: 9.9225

>NTDB_id=328200 EGH13_RS09195 WP_047918176.1 1570850..1571494(-) (dsbA1) [Neisseria gonorrhoeae strain FQ36]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAVVALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=328200 EGH13_RS09195 WP_047918176.1 1570850..1571494(-) (dsbA1) [Neisseria gonorrhoeae strain FQ36]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGTCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

52.151

86.916

0.453

Multiple sequence alignment