Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   FOG69_RS05075 Genome accession   NZ_CP041693
Coordinates   1006968..1008128 (+) Length   386 a.a.
NCBI ID   WP_013351833.1    Uniprot ID   A0A9P1NH11
Organism   Bacillus amyloliquefaciens strain H     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1001968..1013128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOG69_RS05050 (FOG69_05050) - 1002714..1003901 (+) 1188 WP_013351829.1 putative glycoside hydrolase -
  FOG69_RS05055 (FOG69_05055) - 1004019..1004597 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  FOG69_RS05060 (FOG69_05060) spx 1004775..1005170 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  FOG69_RS05065 (FOG69_05065) - 1005228..1005884 (-) 657 WP_013351831.1 TerC family protein -
  FOG69_RS05070 (FOG69_05070) mecA 1006160..1006816 (+) 657 WP_014470612.1 adaptor protein MecA Regulator
  FOG69_RS05075 (FOG69_05075) coiA 1006968..1008128 (+) 1161 WP_013351833.1 competence protein CoiA family protein Machinery gene
  FOG69_RS05080 (FOG69_05080) pepF 1008357..1010186 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  FOG69_RS20610 - 1010222..1010389 (-) 168 WP_003155026.1 hypothetical protein -
  FOG69_RS05085 (FOG69_05085) spxH 1010674..1011576 (-) 903 WP_013351835.1 protease adaptor protein SpxH -
  FOG69_RS05090 (FOG69_05090) - 1011573..1011971 (-) 399 WP_013351836.1 thiol management oxidoreductase -
  FOG69_RS05095 (FOG69_05095) - 1012196..1012882 (-) 687 WP_013351837.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 386 a.a.        Molecular weight: 44761.63 Da        Isoelectric Point: 9.7152

>NTDB_id=328168 FOG69_RS05075 WP_013351833.1 1006968..1008128(+) (coiA) [Bacillus amyloliquefaciens strain H]
MFSALTAEGQLIQLAGSYSKEKAAELRKKRWFCPVCESELDIKLGREKLPHFAHKKSRLCPGESEPESEYHLEGKRQLFL
WLKTQGCAVSLEPYLPSARQRPDLTAESGTERLAFEFQCANLSADSLKSRTAGLKNAGYRPVWIIGAKRLKRLAAHFFRL
SAYHWQLFEVNSFSSLMFYCPDVRSFYKLHSITPFYTGYSYAGLTMIPLHKANLKDISLPEGRHSVNLSSWGRAVAGFRK
KSGRFLSEDAGLIRQLFYERHQIAFPFLPSEVFIPVSAGFVFASPVFVWQGHLYLRLAELCEKGAPIRLSGMVHYLRQKI
RRQEIRMRYDSHEDLIRMAIKQYADFLCLQDFLRETENEVYMPSTQHKRPQTAEELHRRDLLFFRE

Nucleotide


Download         Length: 1161 bp        

>NTDB_id=328168 FOG69_RS05075 WP_013351833.1 1006968..1008128(+) (coiA) [Bacillus amyloliquefaciens strain H]
ATGTTCAGTGCTTTGACTGCCGAGGGACAGCTCATTCAGCTGGCCGGAAGCTATTCAAAAGAAAAAGCGGCGGAGCTGAG
AAAGAAACGCTGGTTCTGCCCCGTTTGTGAAAGTGAGCTTGATATTAAATTGGGACGGGAAAAACTGCCGCACTTCGCTC
ATAAAAAAAGCAGGCTGTGCCCGGGAGAATCCGAACCCGAAAGCGAATATCATCTGGAAGGAAAAAGACAGCTTTTTCTC
TGGCTTAAGACACAAGGTTGCGCCGTCAGCCTAGAGCCGTATCTGCCTTCCGCCCGACAGCGGCCTGATCTGACGGCGGA
AAGCGGCACAGAGCGGCTGGCTTTTGAATTTCAATGTGCAAACCTTTCGGCAGATTCTTTAAAGAGCCGGACGGCCGGCT
TGAAAAACGCCGGGTATCGGCCTGTCTGGATCATCGGAGCAAAACGCTTAAAACGGCTGGCTGCGCATTTTTTCCGGCTT
TCTGCTTATCACTGGCAATTATTTGAAGTTAACTCATTTTCCTCCTTGATGTTTTACTGCCCCGATGTCCGCTCCTTTTA
TAAGCTTCATTCCATCACCCCGTTTTACACCGGCTATTCTTATGCCGGCTTAACCATGATCCCTCTTCATAAAGCAAACC
TGAAAGACATTTCTCTCCCGGAGGGCCGGCACAGCGTCAACCTTTCCTCTTGGGGACGCGCCGTAGCAGGCTTCCGCAAA
AAAAGCGGCCGGTTTTTATCTGAAGATGCAGGTCTTATCCGGCAACTTTTTTACGAACGGCATCAGATTGCCTTTCCTTT
TCTGCCTTCTGAAGTGTTTATCCCCGTTTCAGCGGGCTTTGTGTTTGCAAGTCCCGTTTTTGTGTGGCAGGGCCATTTAT
ACTTGCGGCTTGCGGAGCTTTGTGAAAAAGGCGCACCGATCCGGTTATCCGGCATGGTTCATTATTTGCGGCAAAAAATC
CGGCGGCAGGAGATCAGGATGCGGTATGATTCACATGAAGATCTCATCAGAATGGCGATAAAACAATATGCTGATTTCTT
ATGTTTGCAGGATTTTTTAAGGGAAACTGAGAATGAAGTATATATGCCTTCAACCCAACACAAGCGCCCTCAAACGGCCG
AAGAGCTGCACCGCCGGGACCTGCTCTTTTTTAGGGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1NH11

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

44.947

97.409

0.438