Detailed information NTG0328161

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EGH12_RS10585
• Genome accession: NZ_CP034020
• Coordinates: 1795688..1796941 (-)
• Length: 417 a.a.
• NCBI ID: WP_047921365.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain FQ48
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1790688..1801941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGH12_RS10550 (EGH12_10550)	-	1790941..1791339 (+)	399	Protein_1820	pilin	-
EGH12_RS10555 (EGH12_10555)	-	1791543..1791929 (+)	387	Protein_1821	pilin	-
EGH12_RS10560 (EGH12_10560)	lpxC	1792432..1793355 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
EGH12_RS10565 (EGH12_10565)	-	1793484..1793882 (+)	399	Protein_1823	pilin	-
EGH12_RS10575 (EGH12_10575)	-	1794347..1794490 (+)	144	WP_012503975.1	hypothetical protein	-
EGH12_RS10580 (EGH12_10580)	pilE	1794867..1795385 (+)	519	WP_124935101.1	pilin	Machinery gene
EGH12_RS10585 (EGH12_10585)	pilA	1795688..1796941 (-)	1254	WP_047921365.1	signal recognition particle-docking protein FtsY	Machinery gene
EGH12_RS10595 (EGH12_10595)	msrAB	1797087..1798655 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
EGH12_RS10600 (EGH12_10600)	-	1798739..1799224 (-)	486	WP_003687001.1	CinA family protein	-
EGH12_RS10605 (EGH12_10605)	-	1799250..1800098 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
EGH12_RS10610 (EGH12_10610)	-	1800192..1801193 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44431.78 Da
• Isoelectric Point: 4.7680

>NTDB_id=328161 EGH12_RS10585 WP_047921365.1 1795688..1796941(-) (pilA) [Neisseria gonorrhoeae strain FQ48]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=328161 EGH12_RS10585 WP_047921365.1 1795688..1796941(-) (pilA) [Neisseria gonorrhoeae strain FQ48]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGAACGCAACAATGTAACCGTCATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.281	100	0.993