Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | EGH12_RS10140 | Genome accession | NZ_CP034020 |
| Coordinates | 1720991..1721386 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FQ48 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1715991..1726386
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGH12_RS10085 (EGH12_10085) | - | 1716296..1716541 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| EGH12_RS10095 (EGH12_10095) | - | 1716653..1717081 (+) | 429 | WP_010359204.1 | CopD family protein | - |
| EGH12_RS10100 (EGH12_10100) | - | 1717093..1717569 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| EGH12_RS10105 (EGH12_10105) | - | 1717599..1718087 (-) | 489 | WP_041421364.1 | dihydrofolate reductase | - |
| EGH12_RS10110 (EGH12_10110) | aroG | 1718155..1719210 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| EGH12_RS13550 | - | 1719372..1719599 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| EGH12_RS14440 | - | 1719634..1719783 (+) | 150 | WP_172764044.1 | hypothetical protein | - |
| EGH12_RS14585 (EGH12_10125) | - | 1719825..1720121 (+) | 297 | WP_003698944.1 | hypothetical protein | - |
| EGH12_RS14590 (EGH12_10130) | - | 1720118..1720357 (+) | 240 | WP_012503951.1 | membrane protein | - |
| EGH12_RS14735 (EGH12_10135) | - | 1720910..1721057 (+) | 148 | Protein_1751 | peptidase | - |
| EGH12_RS10140 (EGH12_10140) | comE | 1720991..1721386 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| EGH12_RS14450 (EGH12_10150) | - | 1721488..1721607 (-) | 120 | Protein_1753 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=328158 EGH12_RS10140 WP_003703428.1 1720991..1721386(-) (comE) [Neisseria gonorrhoeae strain FQ48]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=328158 EGH12_RS10140 WP_003703428.1 1720991..1721386(-) (comE) [Neisseria gonorrhoeae strain FQ48]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |