Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | FGF55_RS00145 | Genome accession | NZ_CP041691 |
| Coordinates | 29773..30369 (+) | Length | 198 a.a. |
| NCBI ID | WP_003150697.1 | Uniprot ID | A7Z0E4 |
| Organism | Bacillus amyloliquefaciens strain ZJU1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 24773..35369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGF55_RS00120 (FGF55_00120) | - | 26120..26671 (-) | 552 | WP_014416712.1 | isochorismatase family cysteine hydrolase | - |
| FGF55_RS00125 (FGF55_00125) | tadA | 26754..27236 (+) | 483 | WP_007615141.1 | tRNA adenosine(34) deaminase TadA | - |
| FGF55_RS00135 (FGF55_00135) | dnaX | 27719..29410 (+) | 1692 | WP_014416713.1 | DNA polymerase III subunit gamma/tau | - |
| FGF55_RS00140 (FGF55_00140) | - | 29435..29758 (+) | 324 | WP_003150700.1 | YbaB/EbfC family nucleoid-associated protein | - |
| FGF55_RS00145 (FGF55_00145) | recR | 29773..30369 (+) | 597 | WP_003150697.1 | recombination protein RecR | Machinery gene |
| FGF55_RS00150 (FGF55_00150) | - | 30388..30612 (+) | 225 | WP_007408755.1 | YaaL family protein | - |
| FGF55_RS00155 (FGF55_00155) | - | 30673..30936 (+) | 264 | WP_003150686.1 | pro-sigmaK processing inhibitor BofA family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21990.53 Da Isoelectric Point: 5.3504
>NTDB_id=327975 FGF55_RS00145 WP_003150697.1 29773..30369(+) (recR) [Bacillus amyloliquefaciens strain ZJU1]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDTVLDFAKALVNAKRNLTYCSICGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=327975 FGF55_RS00145 WP_003150697.1 29773..30369(+) (recR) [Bacillus amyloliquefaciens strain ZJU1]
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCAATTTGCGGACATATAACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGGAGGGATAAGTCT
GTTATTTGTGTCGTGCAAGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCGAAGCGGAATC
TGACATATTGCTCAATTTGCGGACATATAACAGATCAGGACCCTTGTTATATATGTGAGGACACAAGGAGGGATAAGTCT
GTTATTTGTGTCGTGCAAGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATATAACGGCCAGTATCATGTTCT
TCACGGCGCGATTTCACCAATGGACGGCATCGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG
ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAAGCAACAGCGATGTATATATCAAGGCTGTTA
AAGCCCTCAGGCATCAAGCTCTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTGATGAGGTCAC
TCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
98.99 |
100 |
0.99 |
| recR | Streptococcus pneumoniae R6 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.551 |
98.99 |
0.52 |