Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   VV7356_RS05775 Genome accession   NZ_CP041683
Coordinates   1209733..1210377 (+) Length   214 a.a.
NCBI ID   WP_011080857.1    Uniprot ID   A0A3Q0L732
Organism   Vibrio vulnificus strain 7356     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204733..1215377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VV7356_RS05765 (VV7356_05820) - 1204880..1206982 (+) 2103 WP_039532669.1 PTS sugar transporter subunit IIC/EAL domain-containing protein -
  VV7356_RS05770 (VV7356_05825) - 1207007..1209376 (-) 2370 WP_039508017.1 DNA polymerase II -
  VV7356_RS05775 (VV7356_05830) letA 1209733..1210377 (+) 645 WP_011080857.1 UvrY/SirA/GacA family response regulator transcription factor Regulator
  VV7356_RS05780 (VV7356_05835) uvrC 1210379..1212211 (+) 1833 WP_017790673.1 excinuclease ABC subunit UvrC -
  VV7356_RS05785 (VV7356_05840) pgsA 1212258..1212815 (+) 558 WP_011080855.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23791.42 Da        Isoelectric Point: 6.4960

>NTDB_id=327905 VV7356_RS05775 WP_011080857.1 1209733..1210377(+) (letA) [Vibrio vulnificus strain 7356]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGENAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMMMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLSINGDVELTHLAIRHGMLDTETL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=327905 VV7356_RS05775 WP_011080857.1 1209733..1210377(+) (letA) [Vibrio vulnificus strain 7356]
TTGATCAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGATAGCGGTGAGAATGCGGTAAAATGGTGTCGTAGCAATCATGCAGACGTCGTTTTAATGG
ATATGAACATGCCTGGTATTGGCGGCTTGGAAGCTACCAAGAAAATTTTGCGTGTTAATCCTGACGTAAAAATCATCGTC
TTAACTGTTCATACGGAAAATCCGTTTCCAACTAAAGTGATGCAAGCGGGGGCTTCTGGTTATTTAACCAAAGGCGCTGG
CCCAGATGAAATGGTGAATGCAATTCGTATTGTCCACAGTGGACAGCGTTATATTTCACCAGAAATTGCGCAGCAAATGG
CGTTAAGCCAGTTTTCGCCTGCGTCCGAAAACCCTTTCAAGGATCTGTCTGAGCGTGAGCTTCAGATCATGATGATGATC
ACGAAAGGTCAGAAAGTGACAGATATTTCTGAGCAGTTAAATCTCAGTCCTAAAACTGTCAACAGCTATCGTTATCGTTT
GTTTAGCAAACTATCGATTAATGGTGACGTAGAGTTAACCCATTTGGCGATTCGCCACGGAATGTTAGATACCGAGACTC
TCTAG

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(149-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q0L732

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

50.476

98.131

0.495
  letA Legionella pneumophila strain ERS1305867

50.476

98.131

0.495