Detailed information NTG0327731

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FNV58_RS22195
• Genome accession: NZ_CP041654
• Coordinates: 4549875..4551161 (-)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. RLB1-9
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4544875..4556161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV58_RS22185 (FNV58_22455)	-	4546022..4548646 (-)	2625	WP_060897737.1	valine--tRNA ligase	-
FNV58_RS22190 (FNV58_22460)	-	4548783..4549781 (+)	999	WP_097284721.1	hypothetical protein	-
FNV58_RS22195 (FNV58_22465)	clpX	4549875..4551161 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNV58_RS22200 (FNV58_22470)	clpP	4551333..4552013 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV58_RS22205 (FNV58_22475)	clpP	4552151..4552756 (-)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV58_RS22210 (FNV58_22480)	tig	4553186..4554592 (-)	1407	WP_060897740.1	trigger factor	-
FNV58_RS55710	-	4555476..4555649 (-)	174	WP_169081042.1	hypothetical protein	-
FNV58_RS57995	-	4555783..4556127 (-)	345	Protein_4201	TMEM175 family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=327731 FNV58_RS22195 WP_054231969.1 4549875..4551161(-) (clpX) [Streptomyces sp. RLB1-9]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=327731 FNV58_RS22195 WP_054231969.1 4549875..4551161(-) (clpX) [Streptomyces sp. RLB1-9]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
TGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACCGCCTCCGTTCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCACTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGATGTCGTCCTGTCCAACGTCAACCCGACGCTGATCCCCCGCGACGCCCGCGGTCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521