Detailed information NTG0327294

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FNV65_RS20650
• Genome accession: NZ_CP041612
• Coordinates: 4528418..4529704 (-)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. S1A1-8
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4523418..4534704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNV65_RS20640 (FNV65_20945)	-	4524565..4527189 (-)	2625	WP_060897737.1	valine--tRNA ligase	-
FNV65_RS20645 (FNV65_20950)	-	4527326..4528324 (+)	999	WP_097284721.1	hypothetical protein	-
FNV65_RS20650 (FNV65_20955)	clpX	4528418..4529704 (-)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FNV65_RS20655 (FNV65_20960)	clpP	4529876..4530556 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV65_RS20660 (FNV65_20965)	clpP	4530694..4531299 (-)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
FNV65_RS20665 (FNV65_20970)	tig	4531729..4533135 (-)	1407	WP_060897740.1	trigger factor	-
FNV65_RS54525	-	4534019..4534192 (-)	174	WP_169081042.1	hypothetical protein	-
FNV65_RS56755	-	4534326..4534670 (-)	345	Protein_4178	TMEM175 family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=327294 FNV65_RS20650 WP_054231969.1 4528418..4529704(-) (clpX) [Streptomyces sp. S1A1-8]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=327294 FNV65_RS20650 WP_054231969.1 4528418..4529704(-) (clpX) [Streptomyces sp. S1A1-8]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
TGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACCGCCTCCGTTCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCACTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGATGTCGTCCTGTCCAACGTCAACCCGACGCTGATCCCCCGCGACGCCCGCGGTCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521