Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   FNV62_RS29020 Genome accession   NZ_CP041610
Coordinates   6392045..6393169 (-) Length   374 a.a.
NCBI ID   WP_054228678.1    Uniprot ID   A0ABU3UNR1
Organism   Streptomyces sp. RLB3-17     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6387045..6398169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNV62_RS28995 (FNV62_29440) cseB 6387613..6388317 (-) 705 WP_097285706.1 two-component system response regulator CseB -
  FNV62_RS29000 (FNV62_29445) - 6388337..6388990 (-) 654 WP_373559504.1 hypothetical protein -
  FNV62_RS29005 (FNV62_29450) - 6388978..6389517 (-) 540 WP_060898668.1 SigE family RNA polymerase sigma factor -
  FNV62_RS29010 (FNV62_29455) - 6389784..6390707 (-) 924 WP_054228676.1 A/G-specific adenine glycosylase -
  FNV62_RS29015 (FNV62_29460) - 6391044..6391889 (+) 846 WP_143602512.1 hypothetical protein -
  FNV62_RS29020 (FNV62_29465) disA 6392045..6393169 (-) 1125 WP_054228678.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  FNV62_RS29025 (FNV62_29470) radA/sms 6393249..6394658 (-) 1410 WP_054228679.1 DNA repair protein RadA Machinery gene
  FNV62_RS29030 (FNV62_29475) - 6394866..6396662 (+) 1797 WP_382142378.1 BACON domain-containing protein -
  FNV62_RS29035 (FNV62_29480) - 6396708..6397568 (-) 861 WP_097285710.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40091.86 Da        Isoelectric Point: 4.9987

>NTDB_id=327224 FNV62_RS29020 WP_054228678.1 6392045..6393169(-) (disA) [Streptomyces sp. RLB3-17]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVDFTATRLR
ELCKLDGGIVVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSDLNALAHSELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=327224 FNV62_RS29020 WP_054228678.1 6392045..6393169(-) (disA) [Streptomyces sp. RLB3-17]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCTGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGGAACACCGGCGGGCTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGACTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTCGTGCC
CGATCCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGATCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTGTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGTCGGCGGTGGCGCAGCGCTTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGGCGGCTGCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGGGAGCTCGTGGTCCGGGACTACGTGCCGGAGCCGACCGCGAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGACCTGAACGCCCTGGCCCACTCCGAGCTGCTCGAACTGCCCACGGTGGCGAGAGCCTTGGGTTACACCG
GCTCCCCCGAGGCGCTCGACTCGGCGGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTCCCGCGTCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTCCTCGCCGCGAGCGTGGACGACCTTCAGGCGGTCGA
CGGAGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGGCTGTCGCGACTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43