Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | EG340_RS12025 | Genome accession | NZ_CP033928 |
| Coordinates | 2604903..2606012 (+) | Length | 369 a.a. |
| NCBI ID | WP_123886407.1 | Uniprot ID | A0A3G6NA26 |
| Organism | Chryseobacterium indoltheticum strain G0211 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2599903..2611012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG340_RS12000 (EG340_12135) | - | 2600125..2600517 (+) | 393 | WP_123886402.1 | four helix bundle protein | - |
| EG340_RS12005 (EG340_12140) | sufD | 2600553..2601860 (+) | 1308 | WP_123886403.1 | Fe-S cluster assembly protein SufD | - |
| EG340_RS12010 (EG340_12145) | - | 2601930..2602850 (-) | 921 | WP_123886404.1 | DUF3078 domain-containing protein | - |
| EG340_RS12015 (EG340_12150) | - | 2602964..2603896 (-) | 933 | WP_123886405.1 | DUF3078 domain-containing protein | - |
| EG340_RS12020 (EG340_12155) | - | 2604100..2604867 (+) | 768 | WP_123886406.1 | rhomboid family intramembrane serine protease | - |
| EG340_RS12025 (EG340_12160) | dprA | 2604903..2606012 (+) | 1110 | WP_123886407.1 | DNA-processing protein DprA | Machinery gene |
| EG340_RS12030 (EG340_12165) | gdhA | 2606204..2607562 (+) | 1359 | WP_123886408.1 | NADP-specific glutamate dehydrogenase | - |
| EG340_RS12035 (EG340_12170) | - | 2607696..2608064 (+) | 369 | WP_123886409.1 | iron chaperone | - |
| EG340_RS12040 (EG340_12175) | - | 2608235..2608723 (-) | 489 | WP_123886410.1 | YkgJ family cysteine cluster protein | - |
| EG340_RS19780 | - | 2608723..2609055 (-) | 333 | WP_317126658.1 | hypothetical protein | - |
| EG340_RS12045 (EG340_12180) | - | 2609056..2609694 (-) | 639 | WP_317126659.1 | potassium channel family protein | - |
| EG340_RS12050 (EG340_12185) | - | 2609829..2610209 (+) | 381 | WP_123886411.1 | group III truncated hemoglobin | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 41424.23 Da Isoelectric Point: 6.8809
>NTDB_id=327220 EG340_RS12025 WP_123886407.1 2604903..2606012(+) (dprA) [Chryseobacterium indoltheticum strain G0211]
MYSEEHLYSIALRECNFIGDINFSKLVRRFGTAENVWKTSKKELSKTDGIGTKIISDIGNPEHYKFAQDELLFCEKNSIK
INLRHQNDLPFLLNECDDAPAILYQKGNFETKHKTISLVGTRNITSYGKKFIEDFFEASKPHPYISVSGLALGVDKEIHE
QSLKNQIPTIGILAHGFHTFYPSANKKLSEKILEESGGLLTEFNSSRKPDRENFIQRNRIIAGISPATIVVETAFGGGSV
STATFANTYNRDVFALPGKITDKYSQGCNQLIFQNKATAISTIKDLLDLLGLNDPKEKIEELFPHSKTTVQLSENQELIY
NQIIENPHITLDDLAEKISVSSHKLLPVILELELLGKVKSFSGRQFIAL
MYSEEHLYSIALRECNFIGDINFSKLVRRFGTAENVWKTSKKELSKTDGIGTKIISDIGNPEHYKFAQDELLFCEKNSIK
INLRHQNDLPFLLNECDDAPAILYQKGNFETKHKTISLVGTRNITSYGKKFIEDFFEASKPHPYISVSGLALGVDKEIHE
QSLKNQIPTIGILAHGFHTFYPSANKKLSEKILEESGGLLTEFNSSRKPDRENFIQRNRIIAGISPATIVVETAFGGGSV
STATFANTYNRDVFALPGKITDKYSQGCNQLIFQNKATAISTIKDLLDLLGLNDPKEKIEELFPHSKTTVQLSENQELIY
NQIIENPHITLDDLAEKISVSSHKLLPVILELELLGKVKSFSGRQFIAL
Nucleotide
Download Length: 1110 bp
>NTDB_id=327220 EG340_RS12025 WP_123886407.1 2604903..2606012(+) (dprA) [Chryseobacterium indoltheticum strain G0211]
ATGTATTCTGAAGAACATCTTTATTCTATCGCTCTGCGGGAGTGTAATTTTATTGGTGATATTAATTTTTCTAAGCTTGT
ACGCCGTTTTGGAACAGCAGAAAATGTTTGGAAAACTTCTAAAAAAGAACTCAGCAAGACGGATGGAATCGGCACAAAAA
TCATTTCCGATATTGGAAATCCTGAGCATTACAAATTTGCTCAAGATGAACTTTTGTTTTGCGAAAAGAATTCTATAAAA
ATTAATTTACGCCATCAAAATGATCTTCCTTTTTTATTGAATGAATGTGACGATGCTCCAGCAATACTCTACCAGAAAGG
AAATTTTGAAACAAAACACAAAACTATAAGCTTAGTCGGAACAAGAAATATAACATCTTACGGGAAAAAATTTATTGAAG
ATTTCTTTGAAGCATCAAAACCACATCCGTATATTTCTGTAAGTGGTCTCGCTTTGGGCGTCGATAAAGAAATTCATGAG
CAATCTTTAAAAAATCAAATTCCCACCATTGGAATTCTGGCCCACGGTTTTCACACTTTCTATCCTTCTGCCAACAAAAA
GCTTTCAGAAAAGATTCTTGAGGAAAGCGGAGGATTGCTTACCGAATTTAATTCATCAAGAAAACCGGATCGCGAAAATT
TCATCCAAAGAAATAGAATTATTGCCGGCATTTCTCCTGCAACCATTGTTGTAGAAACAGCATTTGGCGGCGGTTCCGTC
AGTACTGCAACATTCGCAAATACTTACAACAGAGATGTTTTTGCCCTTCCCGGAAAGATTACCGATAAATACAGCCAAGG
ATGTAATCAACTTATTTTTCAGAACAAAGCGACTGCCATTTCGACCATAAAAGACCTACTTGATCTCCTCGGACTGAATG
ATCCTAAAGAAAAAATTGAAGAACTTTTCCCTCACAGTAAAACAACAGTTCAATTATCTGAAAATCAAGAATTAATATAT
AACCAAATTATAGAAAATCCGCACATTACTTTAGACGATTTGGCGGAGAAAATATCGGTGTCTTCACACAAATTATTACC
TGTAATTTTAGAATTAGAGCTTTTGGGAAAAGTAAAATCATTTTCCGGGAGACAATTTATAGCATTATAA
ATGTATTCTGAAGAACATCTTTATTCTATCGCTCTGCGGGAGTGTAATTTTATTGGTGATATTAATTTTTCTAAGCTTGT
ACGCCGTTTTGGAACAGCAGAAAATGTTTGGAAAACTTCTAAAAAAGAACTCAGCAAGACGGATGGAATCGGCACAAAAA
TCATTTCCGATATTGGAAATCCTGAGCATTACAAATTTGCTCAAGATGAACTTTTGTTTTGCGAAAAGAATTCTATAAAA
ATTAATTTACGCCATCAAAATGATCTTCCTTTTTTATTGAATGAATGTGACGATGCTCCAGCAATACTCTACCAGAAAGG
AAATTTTGAAACAAAACACAAAACTATAAGCTTAGTCGGAACAAGAAATATAACATCTTACGGGAAAAAATTTATTGAAG
ATTTCTTTGAAGCATCAAAACCACATCCGTATATTTCTGTAAGTGGTCTCGCTTTGGGCGTCGATAAAGAAATTCATGAG
CAATCTTTAAAAAATCAAATTCCCACCATTGGAATTCTGGCCCACGGTTTTCACACTTTCTATCCTTCTGCCAACAAAAA
GCTTTCAGAAAAGATTCTTGAGGAAAGCGGAGGATTGCTTACCGAATTTAATTCATCAAGAAAACCGGATCGCGAAAATT
TCATCCAAAGAAATAGAATTATTGCCGGCATTTCTCCTGCAACCATTGTTGTAGAAACAGCATTTGGCGGCGGTTCCGTC
AGTACTGCAACATTCGCAAATACTTACAACAGAGATGTTTTTGCCCTTCCCGGAAAGATTACCGATAAATACAGCCAAGG
ATGTAATCAACTTATTTTTCAGAACAAAGCGACTGCCATTTCGACCATAAAAGACCTACTTGATCTCCTCGGACTGAATG
ATCCTAAAGAAAAAATTGAAGAACTTTTCCCTCACAGTAAAACAACAGTTCAATTATCTGAAAATCAAGAATTAATATAT
AACCAAATTATAGAAAATCCGCACATTACTTTAGACGATTTGGCGGAGAAAATATCGGTGTCTTCACACAAATTATTACC
TGTAATTTTAGAATTAGAGCTTTTGGGAAAAGTAAAATCATTTTCCGGGAGACAATTTATAGCATTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
54.396 |
98.645 |
0.537 |