Detailed information
Bioinformatically predicted
Overview
| Name | sigH | Type | Regulator |
| Locus tag | EG363_RS00010 | Genome accession | NZ_CP033865 |
| Coordinates | 349..918 (+) | Length | 189 a.a. |
| NCBI ID | WP_064135661.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_504 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1..5918
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EG363_RS00010 (EG363_00010) | sigH | 349..918 (+) | 570 | WP_064135661.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| EG363_RS00015 (EG363_00015) | rpmG | 1033..1176 (+) | 144 | WP_001791441.1 | 50S ribosomal protein L33 | - |
| EG363_RS00020 (EG363_00020) | secE | 1232..1414 (+) | 183 | WP_001074473.1 | preprotein translocase subunit SecE | - |
| EG363_RS00025 (EG363_00025) | nusG | 1427..1975 (+) | 549 | WP_001288302.1 | transcription termination/antitermination protein NusG | - |
| EG363_RS00030 (EG363_00030) | rplK | 2156..2578 (+) | 423 | WP_001085792.1 | 50S ribosomal protein L11 | - |
| EG363_RS00035 (EG363_00035) | rplA | 2786..3478 (+) | 693 | WP_001074619.1 | 50S ribosomal protein L1 | - |
| EG363_RS00045 (EG363_00045) | rplJ | 3750..4250 (+) | 501 | WP_124095471.1 | 50S ribosomal protein L10 | - |
| EG363_RS00050 (EG363_00050) | rplL | 4293..4661 (+) | 369 | WP_001273587.1 | 50S ribosomal protein L7/L12 | - |
| EG363_RS00055 (EG363_00055) | - | 4836..5444 (+) | 609 | WP_000020304.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 189 a.a. Molecular weight: 23101.94 Da Isoelectric Point: 9.6015
>NTDB_id=326541 EG363_RS00010 WP_064135661.1 349..918(+) (sigH) [Staphylococcus aureus strain FDAARGOS_504]
MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRRIKTFGFNHYDLEDLYQEILIRMYRSVQTFDFSAEQPFTNYVQC
LITSVKYDYLRKYLATNKRMDNLINEYRVTYPCAIKRYDVENNYLNKLAIKELIRQFKYLSAFEKDVMYLMCEQYKSREI
AQLMHVKEKVIYNAIQRCKNKIKRYFKMI
MKYDLTTQDSTIKRNNAINDKDFEKLVMDLQPLIIRRIKTFGFNHYDLEDLYQEILIRMYRSVQTFDFSAEQPFTNYVQC
LITSVKYDYLRKYLATNKRMDNLINEYRVTYPCAIKRYDVENNYLNKLAIKELIRQFKYLSAFEKDVMYLMCEQYKSREI
AQLMHVKEKVIYNAIQRCKNKIKRYFKMI
Nucleotide
Download Length: 570 bp
>NTDB_id=326541 EG363_RS00010 WP_064135661.1 349..918(+) (sigH) [Staphylococcus aureus strain FDAARGOS_504]
TTGAAATATGATTTGACAACTCAAGACAGTACAATCAAACGTAACAATGCAATAAATGATAAAGACTTCGAAAAGTTAGT
AATGGATCTACAACCATTAATTATACGGCGCATCAAAACATTTGGATTTAATCATTATGATTTAGAAGATTTATATCAAG
AAATACTTATACGGATGTATAGGTCGGTCCAAACATTTGATTTTAGTGCAGAGCAGCCTTTCACAAATTATGTTCAATGT
TTAATTACGTCTGTAAAGTATGATTATTTGAGAAAATATTTAGCTACAAATAAAAGAATGGATAATTTGATTAATGAATA
TAGAGTTACGTATCCATGTGCAATAAAGCGTTATGATGTTGAAAACAATTATTTGAATAAATTAGCAATTAAAGAGTTGA
TTCGTCAGTTTAAGTATTTGAGTGCATTTGAAAAAGATGTCATGTATTTAATGTGTGAACAATATAAGTCGAGAGAAATT
GCTCAACTGATGCATGTAAAAGAGAAAGTGATTTATAATGCCATACAACGATGTAAAAATAAAATAAAACGTTATTTCAA
AATGATTTGA
TTGAAATATGATTTGACAACTCAAGACAGTACAATCAAACGTAACAATGCAATAAATGATAAAGACTTCGAAAAGTTAGT
AATGGATCTACAACCATTAATTATACGGCGCATCAAAACATTTGGATTTAATCATTATGATTTAGAAGATTTATATCAAG
AAATACTTATACGGATGTATAGGTCGGTCCAAACATTTGATTTTAGTGCAGAGCAGCCTTTCACAAATTATGTTCAATGT
TTAATTACGTCTGTAAAGTATGATTATTTGAGAAAATATTTAGCTACAAATAAAAGAATGGATAATTTGATTAATGAATA
TAGAGTTACGTATCCATGTGCAATAAAGCGTTATGATGTTGAAAACAATTATTTGAATAAATTAGCAATTAAAGAGTTGA
TTCGTCAGTTTAAGTATTTGAGTGCATTTGAAAAAGATGTCATGTATTTAATGTGTGAACAATATAAGTCGAGAGAAATT
GCTCAACTGATGCATGTAAAAGAGAAAGTGATTTATAATGCCATACAACGATGTAAAAATAAAATAAAACGTTATTTCAA
AATGATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sigH | Staphylococcus aureus MW2 |
98.413 |
100 |
0.984 |
| sigH | Staphylococcus aureus N315 |
97.354 |
100 |
0.974 |