Detailed information    

insolico Bioinformatically predicted

Overview

Name   lqsT   Type   Regulator
Locus tag   LPA_RS14205 Genome accession   NC_014125
Coordinates   3196436..3196783 (-) Length   115 a.a.
NCBI ID   WP_011947638.1    Uniprot ID   -
Organism   Legionella pneumophila 2300/99 Alcoy     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 3191436..3201783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPA_RS14180 (lpa_03982) - 3192041..3192532 (-) 492 WP_011947632.1 disulfide bond formation protein B -
  LPA_RS14185 (lpa_03984) - 3192529..3192957 (-) 429 WP_011947633.1 cytochrome c5 family protein -
  LPA_RS14190 (lpa_03985) cqsA 3193146..3194396 (+) 1251 WP_011947634.1 quorum-sensing autoinducer LAI-1 synthase LqsA Regulator
  LPA_RS14195 (lpa_03987) - 3194478..3195503 (-) 1026 WP_011947635.1 response regulator -
  LPA_RS14200 (lpa_03988) - 3195785..3196348 (+) 564 WP_011947637.1 HdeD family acid-resistance protein -
  LPA_RS14205 (lpa_03989) lqsT 3196436..3196783 (-) 348 WP_011947638.1 ATP-binding protein Regulator
  LPA_RS14210 (lpa_03990) - 3196910..3197731 (+) 822 WP_228370635.1 IS982 family transposase -
  LPA_RS14215 (lpa_03991) - 3197747..3198751 (-) 1005 WP_011947639.1 hypothetical protein -
  LPA_RS14220 (lpa_03992) hemC 3199141..3200070 (+) 930 WP_041931984.1 hydroxymethylbilane synthase -
  LPA_RS14225 (lpa_03993) - 3200067..3200819 (+) 753 WP_011947641.1 uroporphyrinogen-III synthase -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13258.46 Da        Isoelectric Point: 8.9532

>NTDB_id=32614 LPA_RS14205 WP_011947638.1 3196436..3196783(-) (lqsT) [Legionella pneumophila 2300/99 Alcoy]
MLPFLSLFFRQLYRIHVNLIKNALYVIAMAQRGEINIWTESGDKYHYLYFKDTAKGMSKQQLNRLFNHFYTTTFMGTGIG
LSFCKLVMNAFGGDIVCESKEGEYTLFILSFPGSV

Nucleotide


Download         Length: 348 bp        

>NTDB_id=32614 LPA_RS14205 WP_011947638.1 3196436..3196783(-) (lqsT) [Legionella pneumophila 2300/99 Alcoy]
ATGTTACCATTCTTAAGTTTGTTTTTTAGACAGTTATATCGAATTCACGTTAATTTAATAAAAAATGCGCTTTATGTTAT
CGCAATGGCCCAGCGTGGGGAGATTAATATTTGGACTGAATCTGGCGATAAGTATCATTATTTGTATTTTAAAGACACAG
CAAAAGGGATGAGCAAACAACAATTAAATCGATTATTTAATCATTTCTATACTACTACCTTTATGGGAACAGGCATTGGT
TTATCATTTTGTAAATTGGTTATGAATGCGTTTGGTGGTGATATTGTTTGTGAGTCTAAAGAGGGCGAATACACTTTATT
TATACTGAGTTTTCCAGGCTCGGTTTAA

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(11-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

45.918

85.217

0.391

Multiple sequence alignment