Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   EGX80_RS07230 Genome accession   NZ_CP033815
Coordinates   1353164..1354516 (+) Length   450 a.a.
NCBI ID   WP_002995609.1    Uniprot ID   A0A4U7GC27
Organism   Streptococcus pyogenes strain FDAARGOS_514     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1348164..1359516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX80_RS07205 (EGX80_07215) - 1348312..1348461 (+) 150 WP_002994198.1 hypothetical protein -
  EGX80_RS07210 (EGX80_07220) - 1348856..1350004 (+) 1149 WP_011054267.1 acetyl-CoA C-acyltransferase -
  EGX80_RS07215 (EGX80_07225) - 1349961..1351208 (+) 1248 WP_011054268.1 AMP-binding protein -
  EGX80_RS07220 (EGX80_07230) - 1351304..1352299 (+) 996 WP_011054269.1 DUF3114 domain-containing protein -
  EGX80_RS07225 (EGX80_07235) vicR 1352461..1353171 (+) 711 WP_002985645.1 response regulator YycF Regulator
  EGX80_RS07230 (EGX80_07240) vicK 1353164..1354516 (+) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EGX80_RS07235 (EGX80_07245) vicX 1354520..1355329 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  EGX80_RS07240 (EGX80_07250) rnc 1355772..1356464 (+) 693 WP_002990670.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51391.82 Da        Isoelectric Point: 5.4026

>NTDB_id=326060 EGX80_RS07230 WP_002995609.1 1353164..1354516(+) (vicK) [Streptococcus pyogenes strain FDAARGOS_514]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=326060 EGX80_RS07230 WP_002995609.1 1353164..1354516(+) (vicK) [Streptococcus pyogenes strain FDAARGOS_514]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACTTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATCACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGGATC
GACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U7GC27

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.947

92

0.671

  micB Streptococcus pneumoniae Cp1015

67.765

94.444

0.64


Multiple sequence alignment