Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EGX85_RS13080 | Genome accession | NZ_CP033814 |
| Coordinates | 2628348..2629322 (+) | Length | 324 a.a. |
| NCBI ID | WP_011275668.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain FDAARGOS_517 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2623348..2634322
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX85_RS13045 (EGX85_13070) | rpmG | 2623780..2623929 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| EGX85_RS13050 (EGX85_13075) | - | 2624166..2624702 (+) | 537 | WP_011275662.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EGX85_RS13055 (EGX85_13080) | - | 2624718..2626175 (+) | 1458 | WP_126116888.1 | rhomboid family intramembrane serine protease | - |
| EGX85_RS13060 (EGX85_13085) | - | 2626159..2626362 (+) | 204 | WP_011275664.1 | YqgQ family protein | - |
| EGX85_RS13065 (EGX85_13090) | - | 2626359..2627345 (+) | 987 | WP_011275665.1 | ROK family glucokinase | - |
| EGX85_RS13070 (EGX85_13095) | - | 2627345..2627668 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| EGX85_RS13075 (EGX85_13100) | - | 2627670..2628296 (+) | 627 | WP_011275667.1 | MBL fold metallo-hydrolase | - |
| EGX85_RS13080 (EGX85_13105) | comGA | 2628348..2629322 (+) | 975 | WP_011275668.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EGX85_RS13085 (EGX85_13110) | comGB | 2629294..2630358 (+) | 1065 | WP_011275669.1 | competence type IV pilus assembly protein ComGB | - |
| EGX85_RS13090 (EGX85_13115) | comGC | 2630372..2630692 (+) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EGX85_RS13095 (EGX85_13120) | comGD | 2630682..2631125 (+) | 444 | WP_016931110.1 | competence type IV pilus minor pilin ComGD | - |
| EGX85_RS13100 (EGX85_13125) | - | 2631106..2631405 (+) | 300 | WP_011275672.1 | hypothetical protein | - |
| EGX85_RS13115 (EGX85_13140) | - | 2631974..2632492 (+) | 519 | WP_011275674.1 | shikimate kinase | - |
| EGX85_RS13120 (EGX85_13145) | gcvT | 2632681..2633772 (+) | 1092 | WP_033079984.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37137.14 Da Isoelectric Point: 8.6557
>NTDB_id=326011 EGX85_RS13080 WP_011275668.1 2628348..2629322(+) (comGA) [Staphylococcus haemolyticus strain FDAARGOS_517]
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPTVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSHQSAQSGRYTYQA
KSTFYLRISTLPLSLGIESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYVSSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQFFFEHEQTMPHNFNNLQQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=326011 EGX85_RS13080 WP_011275668.1 2628348..2629322(+) (comGA) [Staphylococcus haemolyticus strain FDAARGOS_517]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGTGACATACATTTTATTCCTACAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTACCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCATCAATCCGCTCAAAGTGGTCGTTATACTTATCAAGCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTATAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGCACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTCATCACTATCGAAAACCCAGTTGAGCAATTACTAAAGGGAATTACTCAAATATCAATTAATAAAAAAGCAGGTATCGA
CTACGTAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTAATTCAAGCTAGTTTGAGTGGACATCTTGTATTATCAACTATGCATTCCACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCGATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATTTTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTACAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.325 |
99.691 |
0.651 |
| comGA | Staphylococcus aureus N315 |
65.325 |
99.691 |
0.651 |