Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   FNL90_RS07740 Genome accession   NZ_CP041408
Coordinates   1500997..1502031 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 37-97S     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1495997..1507031
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL90_RS07705 (FNL90_07970) - 1496773..1497075 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  FNL90_RS07710 (FNL90_07975) rnpM 1497068..1497364 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  FNL90_RS07715 (FNL90_07980) nusA 1497380..1498537 (-) 1158 WP_047235446.1 transcription termination factor NusA -
  FNL90_RS07720 (FNL90_07985) rimP 1498712..1499248 (-) 537 WP_174147175.1 ribosome maturation factor RimP -
  FNL90_RS07730 (FNL90_07995) trmB 1499507..1500142 (-) 636 WP_047235447.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FNL90_RS07735 (FNL90_08000) ccrZ 1500142..1500933 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  FNL90_RS07740 (FNL90_08005) pptB 1500997..1502031 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  FNL90_RS07745 (FNL90_08010) pptA 1502034..1502759 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  FNL90_RS07750 (FNL90_08015) - 1502831..1503250 (+) 420 WP_047235448.1 HIT family protein -
  FNL90_RS07755 (FNL90_08020) - 1503247..1503603 (+) 357 WP_047235449.1 hypothetical protein -
  FNL90_RS07760 (FNL90_08025) - 1503714..1504997 (-) 1284 WP_002983372.1 LCP family protein -
  FNL90_RS07765 (FNL90_08030) - 1505006..1505530 (-) 525 WP_047235450.1 GNAT family N-acetyltransferase -
  FNL90_RS07770 (FNL90_08035) tsaE 1505505..1505966 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=325898 FNL90_RS07740 WP_002994331.1 1500997..1502031(-) (pptB) [Streptococcus pyogenes strain 37-97S]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=325898 FNL90_RS07740 WP_002994331.1 1500997..1502031(-) (pptB) [Streptococcus pyogenes strain 37-97S]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427